Hi, all,
When running > AB.fit=adaboost(ylearn, xlearn, xtest, presel=0) I got the
following error:
Error in `[[<-.data.frame`(`*tmp*`, preds, value = c(4L, 6L, 6L, 6L, 3L, :
replacement has 186 rows, data has 62
The data structure is attached below:
[1] "ylearn"
[1] 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0
0 0 0 0
[40] 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1
[1] "xlearn"
rs2289472 rs1551398 rs7927894
X18 "CT" "AA" "CT"
X19 "TT" "AA" "CC"
X33 "TT" "AG" "TT"
X35 "TT" "AA" "CT"
X36 "CC" "AA" "CT"
X41 "CT" "AA" "CT"
X46 "TT" "AA" "CT"
X65 "CT" "AG" "CT"
X77 "CC" "AA" "CT"
X25 "TT" "AG" "TT"
X26 "CT" "GG" "CC"
X53 "CT" "GG" "CC"
X55 "CT" "AG" "CC"
X57 "CT" "AG" "TT"
X71 "CT" "AA" "CT"
X4 "TT" "AA" "CT"
X7 "CT" "AG" "CT"
X21 "TT" "AA" "CT"
X22 "TT" "AA" "TT"
X31 "CT" "AG" "CT"
X32 "CT" "AG" "TT"
X37 "CT" "AA" "CT"
X50 "TT" "AA" "CT"
X66 "CC" "AA" "CC"
X28 "CT" "AG" "CC"
X29 "CT" "AG" "CT"
X30 "CT" "GG" "CT"
X56 "CT" "AG" "CC"
X62 "CT" "GG" "CC"
X63 "TT" "GG" "CT"
X1 "CT" "AG" "CT"
X3 "TT" "AG" "TT"
X8 "CC" "GG" "CC"
X9 "TT" "AA" "CT"
X38 "CT" "GG" "TT"
X40 "TT" "AG" "CT"
X43 "CT" "AG" "CC"
X45 "TT" "AA" "CC"
X47 "TT" "AA" "TT"
X11 "TT" "AA" "TT"
X13 "CT" "GG" "CT"
X15 "CT" "AG" "TT"
X16 "TT" "AA" "CT"
X27 "CT" "AG" "CC"
X58 "TT" "AG" "CC"
X70 "CT" "AA" "CC"
X2 "CC" "AA" "CT"
X6 "CT" "AA" "CT"
X10 "CC" "AA" "CC"
X14 "TT" "AA" "TT"
X39 "TT" "GG" "CT"
X44 "CT" "AG" "CT"
X49 "TT" "AG" "TT"
X51 "TT" "AA" "CT"
X67 "CT" "AA" "CC"
X12 "CT" "AG" "CT"
X54 "CT" "AG" "CC"
X61 "CT" "AA" "CC"
X68 "CT" "AG" "CC"
X69 "CT" "AG" "TT"
X73 "TT" "AA" "CC"
X74 "TT" "GG" "CT"
[1] "xtest"
rs2289472 rs1551398 rs7927894
5 "TT" "AA" "TT"
20 "CT" "AG" "CC"
23 "CT" "AG" "CT"
24 "CC" "GG" "TT"
34 "CC" "AA" "TT"
42 "CT" "AA" "CT"
48 "CC" "AG" "CC"
59 "CT" "AA" "CC"
75 "CT" "AG" "CT"
17 "CT" "AG" "CT"
52 "CT" "AA" "TT"
60 "CT" "AG" "CT"
64 "TT" "AA" "CT"
72 "TT" "AG" "CT"
76 "TT" "AA" "CT"
do you know what's the protential problem? Thanks in advance.
Xumin
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