On 17.02.2010 08:46, anupam sinha wrote:
Dear all ,
I am trying to install a package by name 'netmodels' keep
on getting the following error :
install.packages("netmodels")
Warning in install.packages("netmodels") :
argument 'lib' is missing: using '/usr/lib64/R/library'
also installing the dependency ‘VGAM’
trying URL 'http://cran.stat.ucla.edu/src/contrib/VGAM_0.7-10.tar.gz'
Content type 'application/x-tar' length 1608488 bytes (1.5 Mb)
opened URL
==================================================
downloaded 1.5 Mb
trying URL 'http://cran.stat.ucla.edu/src/contrib/netmodels_0.2.tar.gz'
Content type 'application/x-tar' length 20049 bytes (19 Kb)
opened URL
==================================================
downloaded 19 Kb
* Installing *source* package ‘VGAM’ ...
** libs
gfortran -fpic -O2 -g -c cqof.f -o cqof.o
gfortran: error trying to exec 'f951': execvp: No such file or directory
make: *** [cqof.o] Error 1
Your installation of the compilers seems to be broken.
You may also want to upgrade to a more recent version of R.
Uwe Ligges
ERROR: compilation failed for package ‘VGAM’
* Removing ‘/usr/lib64/R/library/VGAM’
* Installing *source* package ‘netmodels’ ...
** R
** data
** preparing package for lazy loading
Error : package 'VGAM' required by 'netmodels' could not be found
ERROR: lazy loading failed for package ‘netmodels’
* Removing ‘/usr/lib64/R/library/netmodels’
The downloaded packages are in
‘/tmp/RtmpnUr2jb/downloaded_packages’
Updating HTML index of packages in '.Library'
Warning messages:
1: In install.packages("netmodels") :
installation of package 'VGAM' had non-zero exit status
2: In install.packages("netmodels") :
installation of package 'netmodels' had non-zero exit status
Here's my sessionInfo(). Can anyone help me out with this ?
sessionInfo()
R version 2.9.0 (2009-04-17)
x86_64-redhat-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tcltk_2.9.0 tools_2.9.0
Detecting remotely related proteins by their
Error: unexpected symbol in "Detecting remotely"
interactions and sequence similarity
Error: unexpected symbol in "interactions and"
Regards,
Anupam Sinha
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