Maria,

Try changing the name of .Rhistory in the Startup preferences to something like 
.Rosxhistory. Press enter to make sure the change is accepted and try again.
The problem is that R itself overwrites the file .Rhistory if it is told to 
save the workspace.

Rob



On Dec 9, 2009, at 10:33 AM, Maria Gouskova wrote:

> Dear R users,
> 
> I am having a minor but annoying issue with R.app. It doesn't retain
> the history information from the previous sessions. By "history," I
> mean a record of commands/functions entered into R rather than the
> list of objects--that is properly recorded in the .Rdata file as well
> as in a workspace file I save separately.
> 
> System details:
> 
> R version 2.9.0
> R.app GUI 1.28
> Mac OS 10.6.2 (MacBook, Intel 2.4 GHz, 4 Gb RAM)
> 
> Things I've done:
> 
> R>Preferences>Startup>History: Read history file on startup is
> checked; R history file directory is specified with a path to my
> preferred directory (~/Documents/...). I've tried it with the default
> setting, too--it makes no difference.
> 
> I've checked the permissions on the .Rhistory file. The default
> .Rhistory file created by R has the permissions set at -rw-r--r--.
> 
> I've moved the .Rhistory file to a different location (Desktop), so
> that R would create a new one. Makes no difference--command history is
> still empty at startup.
> 
> R has kept track of history on my system in the past--the file I moved
> to the desktop has a record of my work from about a year ago. (By the
> way, that file's permissions are -rwx-----.) Judging by what is in the
> old .Rhistory file, the problem started around the time of my upgrade
> from 2.7.x to 2.8. I am reluctant to upgrade to R 2.10 in the middle
> of a project, because every R upgrade I've done in the past has broken
> something, and I've had nothing but grief with my open source apps
> after upgrading to Snow Leopard. So if there is some kind of a fix
> that doesn't involve upgrading R, I'd love to hear about it.
> 
> Maria Gouskova
> 
> ______________________________________________
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

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