Hi,

I'm analyzing experimental results where two different events ("T1" and "T2") can occur or not during an experiment. I made my experiments with one factor ("Substrate") with two levels ("Sand" and "Clay"). I would like to know wether or not "Substrate" affects the occurrence probability of the two events. Moreover, for each condition I would like to test the heterogeneity of my experimental contingency table with a theoretical one (from simulations).

However, my problem is that several cells have sampling zeroes. My experiments can't be done again to fill these cells. Thus Chi-square requirements are not fulfilled and I have to find another statistical method.

After spending hours searching for a solution, I thought I could use loglinear model to answer my questions, but : - I'm not sure I can use loglinear model = do I fulfill the required conditions ?
- would this method answer to my hypothesis ?
- I not sure to really understand how I have to use loglin()…

Here is the data frame of my results.

DF<-data.frame(Subs=c(rep("Sand",4),rep("Clay",4)),T1=rep(c ("YES","YES","NO","NO"),2),T2=rep(c("YES","NO","YES","NO"),2),Freq=c (12,5,0,7,24,1,0,0))

What do you think of such datas ? Can I use any statistical method to test my hypothesis ? Any advice ?

Thanks,

Etienne Toffin


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Etienne Toffin, PhD Student
Unit of Social Ecology
Université Libre de Bruxelles, CP 231
Boulevard du Triomphe
B-1050 Brussels
Belgium

Tel: +32(0)2/650.55.30
Fax: +32(0)2/650.57.67
http://www.ulb.ac.be/sciences/use/toffin.html
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