Hi List,
I would like to compare two (confusion) matrices. I ended up with the
ade4 mantel.rtest function as my best option. However it seems that my
data is non-euclidean in nature (is.euclid gives a FALSE). I attached
both matrices at the end of the document.
Are there any tools to transform these matrices into an euclidean form
so I can use mantel.rtest with confidence.
Other suggestions are also welcome.
Kind regards,
Koen
--
matrix 1
V1 V2 V3 V4 V5 V6 V7 V8 V9 V10 V11
1 0 60 5 0 9 3 3 0 18 1 1
2 30 0 12 0 2 45 1 0 5 4 1
3 8 32 0 1 19 5 4 0 27 1 3
4 0 0 3 0 67 1 3 0 0 0 25
5 12 3 13 26 0 12 27 0 3 2 2
6 1 72 1 0 4 0 11 0 0 10 1
7 3 2 9 0 45 40 0 0 0 0 0
8 13 3 0 0 0 1 0 0 10 0 72
9 24 26 34 0 6 2 0 2 0 2 4
10 2 21 1 0 1 67 0 0 1 0 6
11 2 2 28 11 10 10 0 22 3 13 0
matrix 2
V1 V2 V3 V4 V5 V6 V7 V8 V9 V10 V11
1 0 66 0 10 9 5 0 3 7 0 0
2 43 0 0 14 2 32 0 1 5 3 0
3 11 32 4 0 19 10 1 7 13 2 0
4 0 0 0 0 0 0 0 0 0 0 0
5 11 6 4 18 0 15 18 22 4 1 0
6 2 40 3 3 12 0 1 24 1 14 0
7 4 5 0 8 32 49 2 0 0 0 0
8 0 0 0 0 0 0 0 0 0 0 0
9 19 23 2 42 8 2 0 0 0 3 1
10 1 16 3 3 3 73 0 0 2 0 0
11 2 4 0 20 15 10 15 0 10 7 17
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
