Hi Phil: That's EXACTLY what it is. Thanks so much. It's nice to know
that the R Gods don't hate me. I hope it's okay that I'm going to cc
r-help
in case this thread comes up in the future and also so that other people
who might want to help know that it's solved. Thanks again.
On Wed, Oct 29, 2008 at 5:01 PM, Phil Spector wrote:
Mark:
delete workspace? (y/n): print("test of batch\n")
It looks like you've got something in your .Rprofile or .First
that's causing R to prompt you about saving your workspace, and
it's interpreting your program as that response.
Try
R --no-save --vanilla CMD BATCH test.r test.out
- Phil
On Wed, 29 Oct 2008, [EMAIL PROTECTED] wrote:
I usually just run my R programs at the R command prompt but for my
latest one I want to save any output that gets written to the screen
so I am
trying to use R CMD BATCH and send the output to an output file. I
realize I could use sink at the prompt but I'd rather try to do it
this way
because I know that I used to do this in S+.
So, I wrote a simple one line program called test.R which is below.
print("test of batch\n")
Then I did
R CMD BATCH temp.R temp.out
temp.out which is shown below then ends up containing all my loading
up messages and a proc.time statement at the very bottom but not
the print statement itself ? Does someone know what I'm doing wrong.
I've looked around but I can't find anything that answers my
question. My sessionInfo() is at ther very bottom of this email.
Thanks.
#===================================================================================
R version 2.7.2 (2008-08-25)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
[1] "LOADING MASS LIBRARY"
Loading required package: graphics
Loading required package: stats
Loading required package: utils
[Previously saved workspace restored]
Welcome to R!
delete workspace? (y/n): print("test of batch\n")
[1] "LOADING LPSOLVE LIBRARY \n"
[1] "LOADING RESHAPE LIBRARY \n"
[1] "LOADING FILEHASH LIBRARY \n"
filehash: Simple key-value database (2.0 2008-08-03)
[1] "LOADING USINGR LIBRARY \n"
[1] "LOADING CAR LIBRARY \n"
[1] "LOADING EFFECTS LIBRARY \n"
Loading required package: lattice
Loading required package: grid
Attaching package: 'effects'
The following object(s) are masked from package:car :
Cowles,
Prestige
[1] "LOADING NNET LIBRARY \n"
[1] "LOADING LATTICE LIBRARY \n"
[1] "LOADING ML FUTURES TOOLS LIBRARY"
[1] "LOADING ML MISC TOOLS LIBRARY"
[1] "LOADING ML TEST TOOLS LIBRARY"
[1] "LOADING ML STOCK TOOLS LIBRARY"
[1] "LOADING ML DECILE TOOLS LIBRARY"
[1] "LOADING ML MULTINOM TOOLS LIBRARY"
The following object(s) are masked from package:utils :
memory.size
Goodbye!
proc.time()
user system elapsed
3.061 0.087 3.252
#====================================================================================
sessionInfo()
R version 2.7.2 (2008-08-25)
i686-redhat-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] datasets grid utils stats graphics grDevices
methods base
other attached packages:
[1] nnet_7.2-44 effects_1.0-12 lattice_0.17-14 car_1.2-8
UsingR_0.1-8 filehash_2.0 reshape_0.8.0 lpSolve_5.6.4
MASS_7.2-44
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______________________________________________
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
