>>>>> Duncan Murdoch >>>>> on Wed, 23 Oct 2024 05:33:57 -0400 writes:
> I've cc'd this to the package maintainer, Andy Liaw > <andy_l...@merck.com>. I'm not sure he reads this list. > Duncan Murdoch Also, note that you should check for absolute difference, i.e., if (abs(sum(cutoff) - 1) > .Machine$double.eps || ... and I'd really recommend if (isTRUE(all.equal(1, sum(cutoff))) || .... Martin Maechler > On 2024-10-23 1:26 a.m., Stevie Pederson wrote: >> Hi, >> >> It appears there is an OSX-specific bug in the function >> `randomForest.default()` Going by the source code at >> https://github.com/cran/randomForest/blob/master/R/randomForest.default.R >> the bug is on line 103 >> >> If the vector `cutoff` is formed using `cutoff <- >> rep(1/9, 9)` (line #101) the test on line 103 will fail >> on OSX as the sum is greater than 1 due to machine >> precision errors. >> >> sum(rep(1 / 9, 9)) - 1 # [1] 2.220446e-16 >> >> This will actually occur for a scenario when the number >> of factor levels (nclass) is 9, 11, 18, 20 etc.The >> problem does not occur on Linux, and I haven't tested on >> WIndows. >> >> A suggestion may be to change the opening test >> >> if (sum(cutoff) > 1 || ...) >> >> to >> >> if (sum(cutoff) - 1 > .Machine$double.eps || ... >> >> however, I'm sure there's a more elegant way to do this >> >> Thanks in advance >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help@r-project.org mailing list -- To UNSUBSCRIBE and >> more, see https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> https://www.R-project.org/posting-guide.html and provide >> commented, minimal, self-contained, reproducible code. > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and > more, see https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > https://www.R-project.org/posting-guide.html and provide > commented, minimal, self-contained, reproducible code. ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide https://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.