1. This is R-help. RStudio is a separate IDE from a private for-profit company. You should go to their website for help with that: https://www.rstudio.com/support/
2. I may be wrong, of course, but I believe your information is too vague for folks to provide useful help: "row names collided with each other in a messy way,' does not tell us much. What error message did you get? Please provide a small, reproducible example (perhaps via head(yourdatset, ...) see e.g. ?head and ?dput and https://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example . You may also wish to download and use the "reprex" package for this purpose, instead. **See also the posting guide linked below.** All of us were newbies at one time; take the time to learn these tools and follow the advice for posting to R-help, and I believe that you will have much greater success in getting useful help here as you climb the learning curve. Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Wed, Aug 11, 2021 at 9:07 AM Elham Hooshmand <[email protected]> wrote: > > Hi, > > I am trying to draw a heatmap for my 45 topvar gene by the use of > heatmap.2, and when I set a srtRow=45 in my code(below): > > heatmap.2( assay(rld)[ topVarGenes, ], srtRow=45, scale="row",trace="none", > dendrogram="column",col = colorRampPalette( rev(brewer.pal(9, "RdBu")) > )(255)) > > row names collided with each other in a messy way. > > would you please help me to solve this problem? (also I'm a newbie beginner > using R Studio) Thank you so much > (also I attached the output image) > ______________________________________________ > [email protected] mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ______________________________________________ [email protected] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
