Respected Sir, I Mr Kishor Tried to get help online but wont found the solution so writting an email.
Step1: While writting in rmarkdown all codes get executted very well till the fuction Confusionmatrix were written on it. Step2: As confusionmatrix command inserted following error is on screen board processing file: RMarkdown.Rmd |..... | 7% ordinary text without R code |......... | 13% label: unnamed-chunk-1 |.............. | 20% ordinary text without R code |................... | 27% label: unnamed-chunk-2 |....................... | 33% ordinary text without R code |............................ | 40% label: unnamed-chunk-3 |................................. | 47% ordinary text without R code |..................................... | 53% label: unnamed-chunk-4 |.......................................... | 60% ordinary text without R code |............................................... | 67% label: unnamed-chunk-5 |................................................... | 73% ordinary text without R code |........................................................ | 80% label: unnamed-chunk-6 |............................................................. | 87% ordinary text without R code |................................................................. | 93% label: unnamed-chunk-7 Quitting from lines 98-104 (RMarkdown.Rmd) Error in confusionMatrix(p1, train$CTestresult) : could not find function "confusionMatrix" Calls: <Anonymous> ... handle -> withCallingHandlers -> withVisible -> eval -> eval Execution halted Step4: As codes were written these Using function “sample” the data takes into sample of the specified size from the stored data ```{r} set.seed(1234) ind<-sample(2,nrow(FEVER1),replace=TRUE, pro = c(0.7,0.3)) train<-FEVER1[ind==1,] test<-FEVER1[ind==2,] ``` Application of Random Forest ```{r} library(randomForest) set.seed(123) rfmodel<-randomForest(CTestresult~.,data = train,prox=TRUE) # Random Forest Model plot(rfmodel,main="RandomForest Model") print(rfmodel,train) # Printing Outcome of 'model for Training Data ``` Prediction using Randome Forest Model ```{r} # Prediction of RandomForest Intial Model for Test and Train Data ptrain1<-predict(rfmodel,train) # Predicting model Prediction On Training Data # First Six Outcomes with prediction head(ptrain1) # Printing First Six Prediction using Random Forest Model head(train$CTestresult) # Printing First Six (6) Actual outcomes ``` Tuning Model: Tuning of Machine learning model is important step for building good model for best outcome of research. ```{r} # Tunning RandomForest Model using Algorithm t<-tuneRF(train[,-11],train$CTestresult, mtryStart = 2,ntreeTry = 100, stepFactor =2,improve = 0.051,trace = TRUE, plot = TRUE, doBest=TRUE) ``` Building New Model: New model was build on the basis of tunned model parameters and controls. ```{r} # New Model After Tuning Random Forest Model rf1<-randomForest(CTestresult~.,data = train,ntree = 100, mtry = 8, importance = TRUE,proximity = TRUE) print(rf1) ``` Prediction and Confusion MAtrix: outcome of model will mesuare with the help of predictive outcomes with the help of confusion matrix. ```{r} # Prediction using Random Forest and Confusion Matrix for Train Data p1<-predict(rf1,train) cmatrix<-confusionMatrix(p1,train$CTestresult) cmatrix ``` I will great thank full if you will help me for to remove the error. -- *Kind Regards* Kishor Raut *Cell No.-07387706552* [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.