Dear Sarah, thank you very much for pointing to the list of available packages and algorithms.
On Mon, Jul 6, 2020 at 10:20 AM Sarah Goslee <sarah.gos...@gmail.com> wrote: > Hi, > > Unsupervised classification (clustering) is a huge field. There's an > entire task view devoted to it, where you can see many of the large > array of R packages that perform some sort of clustering. > > https://cran.r-project.org/web/views/Cluster.html > > Since that is an overwhelming list, you may be best served by looking > at how others in your field have approached similar problems, and then > look for R packages that perform the relevant analyses. > > Sarah > > On Mon, Jul 6, 2020 at 1:11 PM Bogdan Tanasa <tan...@gmail.com> wrote: > > > > Dear all, > > > > please may I ask for a suggestion regarding the algorithms to cluster the > > expression data in single cells (scRNA-seq) at multiple time points : > > > > we do have expression data for 30 000 genes in 10 datasets that have > been > > collected at multiple time points, > > > > and i was wondering if you could please recommend *any algorithms/R > > packages that could help with the clustering of the gene expression at > > different time points.* thanks a lot, and all the best, > > > > -- bogdan > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > > > -- > Sarah Goslee (she/her) > http://www.numberwright.com > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
