All good. Thanks > On Oct 10, 2019, at 1:08 PM, Martin Morgan <mtmorgan.b...@gmail.com> wrote: > > Please follow the response to your question on the Bioconductor support site > > https://support.bioconductor.org/p/125493/ > > Martin Morgan > > On 10/10/19, 12:23 PM, "R-help on behalf of Ali Siavosh" > <r-help-boun...@r-project.org on behalf of ali.siav...@gmail.com> wrote: > > Hi, > I have installation of R in a server running on redhat 7. I have upgraded > R and now to upgrade BiocManager I get error messages as below: > >> install.packages("BiocManager") > Installing package into ‘/usr/lib64/R/library’ > (as ‘lib’ is unspecified) > trying URL > 'https://cran.revolutionanalytics.com/src/contrib/BiocManager_1.30.7.tar.gz' > Content type 'application/octet-stream' length 38020 bytes (37 KB) > ================================================== > downloaded 37 KB > > * installing *source* package ‘BiocManager’ ... > ** package ‘BiocManager’ successfully unpacked and MD5 sums checked > ** using staged installation > ** R > ** inst > ** byte-compile and prepare package for lazy loading > ** help > *** installing help indices > converting help for package ‘BiocManager’ > finding HTML links ... done > BiocManager-pkg html > available html > install html > repositories html > valid html > version html > ** building package indices > ** installing vignettes > ** testing if installed package can be loaded from temporary location > ** testing if installed package can be loaded from final location > ** testing if installed package keeps a record of temporary installation > path > * DONE (BiocManager) > Making 'packages.html' ... done > > The downloaded source packages are in > ‘/tmp/RtmpgHhwMp/downloaded_packages’ > Updating HTML index of packages in '.Library' > Making 'packages.html' ... done >> BiocManager::version() > Error: .onLoad failed in loadNamespace() for 'BiocManager', details: > call: NULL > error: Bioconductor version '3.8' requires R version '3.5'; see > https://bioconductor.org/install >> BiocManager::valid() > Error: .onLoad failed in loadNamespace() for 'BiocManager', details: > call: NULL > error: Bioconductor version '3.8' requires R version '3.5'; see > https://bioconductor.org/install >> BiocManager::install(version="3.5") > Error: .onLoad failed in loadNamespace() for 'BiocManager', details: > call: NULL > error: Bioconductor version '3.8' requires R version '3.5'; see > https://bioconductor.org/install >> BiocManager::install(version="3.7") > Error: .onLoad failed in loadNamespace() for 'BiocManager', details: > call: NULL > error: Bioconductor version '3.8' requires R version '3.5'; see > https://bioconductor.org/install <https://bioconductor.org/install> > > > I appreciate any help with regard to this. > Thank you > > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >
______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
