Hello,

Maybe I don't understand the question but isn't all you have to do is to, well, reverse the colors

col = c("palevioletred1", "royalblue1")

in the boxplot call?

boxplot(flcn_M ~ subject, data = dx,
        col = c("palevioletred1", "royalblue1"),
        xlab="subjects",
        ylab="Expression estimate in delta (log2)",
        boxwex = 0.2,
        frame.plot = FALSE)
stripchart(flcn_M ~ subject, vertical = TRUE,
           data = dx,
           method = "jitter",
           add = TRUE,
           pch = 20,
           col = rgb(0, 0, 0, 0.5),
           jitter = 0.001)


Hope this helps,

Rui Barradas

Às 18:49 de 08/08/19, Ana Marija escreveu:
Hello,

I made plot in attach using:

boxplot(flcn_M~subject,data=dx,col =
c("royalblue1","palevioletred1"),xlab="subjects",ylab="Expression
estimate in delta (log2)",boxwex = 0.2,frame.plot = FALSE)
stripchart(flcn_M~subject, vertical = TRUE, data = dx,method =
"jitter", add = TRUE,pch = 20, col=rgb(0,0,0,.5),jitter = 0.001)

How do I reverse colors so that PDR is shown in this pink and nDR in blue?

Thanks
Ana

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