Ralf:
You are afflicted with several mind bugs:
* the "my-way mind bug" -- "I want to do it MY WAY, because that's sort
of what
I know" and also,
* the "my-square-peg-should-fit-into-this-round-hole mind bug" -- "R
should be able to
do it MY WAY, but it puts obstacles in my path," perhaps a subsidiary,
but more technical:
* the "loading-a-function-or-data-is-the-same mind bug"
As in many things R, you can't always get to MY WAY from there, at least
not without a tortuous journey.
You think you should be able to do everything you want in .Rprofile, but
then you posed two separate problems:
(a) save/reload history
(b) save/reload functions and data
If you recognize them as two separate problems, there is an easier path:
(a) use .Rprofile only for making your history persistent, as I described
(b) Put your functions & data you always want available in a package;
you can load it from .Rprofile
I originally defined a bunch of handy functions (e.g., cd(), a setwd()
replacement, that works more like `cd` on unix, in that `cd()` returns
to the previous directory; it also changes the Windows title to
`RGui:` abbreviation of getwd() )
I moved them all out of .Rprofile, made a package `myutil` and now load
them from there with
#======================
# load default packages
#======================
if (!require(myutil)) warning("myutil functions not available")
hope this helps,
-Michael
On 5/9/2017 10:20 AM, Ralf Goertz wrote:
Am Sat, 6 May 2017 11:17:42 -0400
schrieb Michael Friendly <frien...@yorku.ca>:
On 5/5/2017 10:23 AM, Ralf Goertz wrote:
Am Fri, 05 May 2017 07:14:36 -0700
schrieb Jeff Newmiller <jdnew...@dcn.davis.ca.us>:
R normally prompts you to save .RData, but it just automatically
saves .Rhistory... the two are unrelated.
Not here. If I say "n" to the prompted question "Save workspace
image? [y/n/c]: " my history doesn't get saved.
Version:
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-suse-linux-gnu (64-bit)
On Windoze, here's what I use in my .Rprofile, which runs every time
I start an RGUI coonsole. The key is .First & .Last to load/save
history automagically.
Hi Michael,
thanks. This helps with saving the history without saving the data. But
actually I'd really like to save both and still be able to load
functions automatically from .Rprofile. Not saving the data as Jeff
suggested is not a good option because it is sometimes tedious to
rebuild my environment by reexecuting commands in the history. And I
explained in my OP why I can't use .First() to achieve my goal.
But let me try again to explain the problem because I think not
everybody understood what I was trying to say. For simplicity I use the
plain variable "a" instead of a function. Start a fresh session and
remove all variables, define one variable and quit with saving:
rm(list=ls())
a=17
quit(save="yes")
Now, before opening a new session edit .Rprofile such that it contains
just the two lines:
print("Hello from .Rprofile")
a=42
Start a new session where your saved environment will be loaded.
Observe that you see the line
[1] "Hello from .Rprofile"
proving that the commands in .Rprofile have been executed. Now look at
"a":
a
[1] 17
You would expect to see this because *after* your "Hello" line you find
[Previously saved workspace restored]
So you have set "a" to 42 in .Rprofile but it gets overwritten from the
previously saved and now restored workspace. On the other hand, .First()
gets executed after the restoring of the workspace. Therefore, I could
edit .Rprofile to read
.First=function(){ assign("a",42,pos=1) }
Now, after starting I see that "a" is indeed 42. But then it turns out
that from now on I need "a" to be 11. After editing .Rprofile
accordingly, I am quite hopeful but after starting a new session I see
that "a" is still 42. Why is that? Because .First() was saved and when I
started a new session it got a new function body (setting "a" to 11) but
before it could be executed it was again overwritten by the old value
(setting "a" to 42) and I am chasing my own tail. Sigh.
.Last() doesn't help. Apparently (at least on my linux system) it is
executed *after* saving the environment so too late to remove anything
you don't want saved. In that regard linux doesn't seem to be typical,
since in "?.Last" the reverse order is described as typical:
Exactly what happens at termination of an R session depends on the
platform and GUI interface in use. A typical sequence is to run
‘.Last()’ and ‘.Last.sys()’ (unless ‘runLast’ is false), to save
the workspace if requested (and in most cases also to save the
session history: see ‘savehistory’), then run any finalizers (see
‘reg.finalizer’) that have been set to be run on exit, close all
open graphics devices, remove the session temporary directory and
print any remaining warnings (e.g., from ‘.Last()’ and device
closure).
IMHO this is a design flaw.
Ralf
--
Michael Friendly Email: friendly AT yorku DOT ca
Professor, Psychology Dept. & Chair, Quantitative Methods
York University Voice: 416 736-2100 x66249 Fax: 416 736-5814
4700 Keele Street Web:http://www.datavis.ca
Toronto, ONT M3J 1P3 CANADA
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