> On Dec 31, 2016, at 11:22 AM, Elham - via R-help <r-help@r-project.org> wrote:
>
> hello all,I am following this link
> http://genomicsclass.github.io/book/pages/GEOquery.html for importing
> data.but I have a problem in a step of (Access GSE Data Tables from GEO).in
> the example of tutorial there are 266 samples,but by this function
> dim(pData(gse[[1]]))head(pData(gse[[1]])[, 1:3])
> the result in R is:
>
>> dim(pData(gse[[1]]))[1] 266 47> head(pData(gse[[1]])[, 1:3]) title
>> geo_accession statusGSM540108 BC1 GSM540108 Public on
>> May 05 2010GSM540109 BC2 GSM540109 Public on May 05 2010GSM540110
>> BC3 GSM540110 Public on May 05 2010GSM540111 BC4 GSM540111 Public
>> on May 05 2010GSM540112 BC5 GSM540112 Public on May 05 2010GSM540113
>> BC6 GSM540113 Public on May 05 2010
> where is another samples?
> [[alternative HTML version deleted]]
This is the first code seen at that page:
source("http://bioconductor.org/biocLite.R";)
biocLite("GEOquery")
You were told earlier that rhelp is NOT the correct place to post questions
about Bioconductor packages. What is the cause of your difficulty in
understanding this fact?
--
David Winsemius
Alameda, CA, USA
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