> On Dec 31, 2016, at 11:22 AM, Elham - via R-help <r-help@r-project.org> wrote: > > hello all,I am following this link > http://genomicsclass.github.io/book/pages/GEOquery.html for importing > data.but I have a problem in a step of (Access GSE Data Tables from GEO).in > the example of tutorial there are 266 samples,but by this function > dim(pData(gse[[1]]))head(pData(gse[[1]])[, 1:3]) > the result in R is: > >> dim(pData(gse[[1]]))[1] 266 47> head(pData(gse[[1]])[, 1:3]) title >> geo_accession statusGSM540108 BC1 GSM540108 Public on >> May 05 2010GSM540109 BC2 GSM540109 Public on May 05 2010GSM540110 >> BC3 GSM540110 Public on May 05 2010GSM540111 BC4 GSM540111 Public >> on May 05 2010GSM540112 BC5 GSM540112 Public on May 05 2010GSM540113 >> BC6 GSM540113 Public on May 05 2010 > where is another samples? > [[alternative HTML version deleted]]
This is the first code seen at that page: source("http://bioconductor.org/biocLite.R") biocLite("GEOquery") You were told earlier that rhelp is NOT the correct place to post questions about Bioconductor packages. What is the cause of your difficulty in understanding this fact? -- David Winsemius Alameda, CA, USA ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.