Hello Uwe Ligges,
Thanks for your attention
I run the code with option: debug=T, so I get the log file!
I think that the stone in my shoe is: "educational version cannot do
this model"...
Am I right?
TIA
Cleber
--------------------------------------------------------------------------
display(log)
check(C:/Documents and Settings/cborges/Meus documentos/bugsWD/qwzx.txt)
model is syntactically correct
data(C:/Documents and Settings/cborges/Meus documentos/bugsWD/data.txt)
data loaded
compile(4)
educational version cannot do this model
inits(1,C:/Documents and Settings/cborges/Meus documentos/bugsWD/inits1.txt)
command #Bugs:inits cannot be executed (is greyed out)
inits(2,C:/Documents and Settings/cborges/Meus documentos/bugsWD/inits2.txt)
command #Bugs:inits cannot be executed (is greyed out)
inits(3,C:/Documents and Settings/cborges/Meus documentos/bugsWD/inits3.txt)
command #Bugs:inits cannot be executed (is greyed out)
inits(4,C:/Documents and Settings/cborges/Meus documentos/bugsWD/inits4.txt)
command #Bugs:inits cannot be executed (is greyed out)
gen.inits()
command #Bugs:gen.inits cannot be executed (is greyed out)
thin.updater(3)
update(834)
command #Bugs:update cannot be executed (is greyed out)
set(alpha)
command #Bugs:set cannot be executed (is greyed out)
set(beta)
command #Bugs:set cannot be executed (is greyed out)
set(sigma.mi)
command #Bugs:set cannot be executed (is greyed out)
set(sigma.ir)
command #Bugs:set cannot be executed (is greyed out)
set(sigma.mir)
command #Bugs:set cannot be executed (is greyed out)
set(deviance)
command #Bugs:set cannot be executed (is greyed out)
dic.set()
command #Bugs:dic.set cannot be executed (is greyed out)
update(834)
command #Bugs:update cannot be executed (is greyed out)
coda(*,C:/Documents and Settings/cborges/Meus documentos/bugsWD/coda)
command #Bugs:coda cannot be executed (is greyed out)
stats(*)
command #Bugs:stats cannot be executed (is greyed out)
dic.stats()
DIC
history(*,C:/Documents and Settings/cborges/Meus
documentos/bugsWD/history.odc)
command #Bugs:history cannot be executed (is greyed out)
save(C:/Documents and Settings/cborges/Meus documentos/bugsWD/log.odc)
save(C:/Documents and Settings/cborges/Meus documentos/bugsWD/log.txt)
Yes: Please do what the error message tells you to do.
Uwe Ligges
Cleber Nogueira Borges wrote:
Hi,
I tried to use MethComp library and this library make use of the
WinBUGS by R2WinBuGUS,
but I get the follow error in bugs.run:
*Error in bugs.run(n.burnin, bugs.directory, WINE = WINE, useWINE =
useWINE, : *
Look at the log file and
try again with 'debug=TRUE' to figure out what went wrong within Bugs.
Anyone can help-me, please?
Thanks
Cleber
library( MethComp )
library( R2WinBUGS )
library( Epi )
# source("c:/stat/r/bxc/library.sources/methcomp/r/tab.repl.r")
# source("c:/stat/r/bxc/library.sources/methcomp/r/MCx.r")
# The oximetry example
#-------------------------------------------------------------------------------
# First the full story
data( ox )
str( ox )
tab.repl( ox )
*options( bugs.directory="c:/R/WinBUGS14/")*
( ox.mi.ir <- MethComp( ox, n.iter=5000 ) )
Comparison of 2 methods, using 354 measurements
on 61 items, with up to 3 replicate measurements,
(with the values in the set: 1 2 3 )
( 2 * 61 * 3 = 366 ):
No. items with measurements on each method:
Simulation run of a model with
- method by item and item by replicate interaction:
- using 4 chains run for 5000 iterations
(of which 2500 are burn-in),
- monitoring every 3 values of the chain:
- giving a posterior sample of 3333 observations.
*Error in bugs.run(n.burnin, bugs.directory, WINE = WINE, useWINE =
useWINE, : *
Look at the log file and
try again with 'debug=TRUE' to figure out what went wrong within Bugs.
In addition: Warning message:
In pt(q, df, lower.tail, log.p) : NaNs produced
>
> sessionInfo()
R version 2.7.0 (2008-04-22)
i386-pc-mingw32
locale:
LC_COLLATE=Portuguese_Brazil.1252;LC_CTYPE=Portuguese_Brazil.1252;LC_MONETARY=Portuguese_Brazil.1252;LC_NUMERIC=C;LC_TIME=Portuguese_Brazil.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods
base other attached packages:
[1] Epi_1.0.8 R2WinBUGS_2.1-8 coda_0.13-2 lattice_0.17-8
MethComp_0.2.0 nlme_3.1-89 loaded via a namespace (and not attached):
[1] grid_2.7.0 tools_2.7.0
>
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