> hist(data$FRic) Error in data$FRic : object of type 'closure' is not subsettable
2016-02-22 14:10 GMT+00:00 stephen sefick <ssef...@gmail.com>: > Please see ?dput. What you provided is not a minimal, reproducible example > (i.e., there is no R code). > > What kind of plot are you trying to plot? hist(data$FRic) will plot your > data. I guess we need more information to be helpful. > > > On Mon, Feb 22, 2016 at 8:03 AM, Fabio Monteiro < > fabio.monteiro1...@gmail.com> wrote: > >> This is the output. >> >> I want to plot, for example FRic >> >> $nbsp >> com1 com2 com3 com4 com5 com6 com7 com8 com9 com10 com11 com12 >> com13 com14 com15 com16 >> 17 21 18 12 15 20 16 12 18 15 18 16 >> 10 11 17 20 >> com17 com18 com19 com20 com21 com22 com23 com24 com25 com26 com27 com28 >> com29 com30 com31 com32 >> 9 13 11 10 11 15 12 16 18 18 11 19 >> 12 13 13 12 >> com33 com34 com35 com36 com37 com38 com39 com40 com41 com42 com43 com44 >> com45 com46 com47 com48 >> 15 11 15 8 7 12 10 9 12 15 13 13 >> 15 13 10 16 >> com49 com50 com51 com52 com53 com54 com55 com56 com57 com58 com59 com60 >> com61 com62 com63 com64 >> 14 12 14 13 14 13 15 13 11 12 16 13 >> 9 8 11 15 >> com65 com66 com67 com68 com69 com70 com71 com72 com73 com74 com75 com76 >> com77 com78 com79 com80 >> 13 18 13 15 10 11 12 11 14 8 10 12 >> 11 12 14 13 >> com81 com82 >> 9 12 >> >> $sing.sp >> com1 com2 com3 com4 com5 com6 com7 com8 com9 com10 com11 com12 >> com13 com14 com15 com16 >> 17 21 18 12 15 20 16 12 18 15 18 16 >> 10 11 17 20 >> com17 com18 com19 com20 com21 com22 com23 com24 com25 com26 com27 com28 >> com29 com30 com31 com32 >> 9 13 11 10 11 15 12 16 18 18 11 19 >> 12 13 13 12 >> com33 com34 com35 com36 com37 com38 com39 com40 com41 com42 com43 com44 >> com45 com46 com47 com48 >> 14 11 15 8 7 12 10 9 12 15 13 13 >> 15 13 10 16 >> com49 com50 com51 com52 com53 com54 com55 com56 com57 com58 com59 com60 >> com61 com62 com63 com64 >> 14 12 13 13 14 13 15 13 11 12 16 13 >> 9 8 11 15 >> com65 com66 com67 com68 com69 com70 com71 com72 com73 com74 com75 com76 >> com77 com78 com79 com80 >> 13 17 13 15 10 11 12 11 14 8 10 12 >> 11 12 14 13 >> com81 com82 >> 9 12 >> >> $FRic >> com1 com2 com3 com4 com5 >> com6 com7 >> 3.669752e-04 6.898164e-04 6.893918e-04 3.935451e-05 1.436140e-04 >> 1.012949e-03 2.934536e-04 >> com8 com9 com10 com11 com12 >> com13 com14 >> 1.001556e-04 6.425547e-04 1.740235e-04 5.561802e-04 2.964362e-04 >> 1.480860e-05 1.060512e-04 >> com15 com16 com17 com18 com19 >> com20 com21 >> 4.121157e-04 5.346433e-04 1.108007e-06 5.726895e-05 8.593435e-06 >> 1.452446e-05 1.855957e-05 >> com22 com23 com24 com25 com26 >> com27 com28 >> 2.128971e-04 8.438329e-05 3.216279e-04 2.529525e-04 4.980317e-04 >> 3.111325e-05 6.290088e-04 >> com29 com30 com31 com32 com33 >> com34 com35 >> 3.559802e-05 5.907167e-05 8.906878e-05 2.510168e-05 1.929088e-04 >> 1.234508e-04 2.784301e-04 >> com36 com37 com38 com39 com40 >> com41 com42 >> 1.480560e-08 1.411752e-06 5.576549e-05 2.445569e-05 6.167242e-06 >> 1.210002e-04 1.666034e-04 >> com43 com44 com45 com46 com47 >> com48 com49 >> 1.203484e-04 7.347513e-05 8.991003e-05 8.691148e-05 6.718789e-05 >> 1.357136e-04 1.821851e-04 >> com50 com51 com52 com53 com54 >> com55 com56 >> 4.832203e-05 8.391627e-05 2.173971e-04 1.355160e-04 1.304425e-04 >> 1.787888e-04 1.759204e-05 >> com57 com58 com59 com60 com61 >> com62 com63 >> 9.307474e-05 1.185857e-04 2.776166e-04 1.277143e-04 5.905299e-06 >> 9.606009e-08 1.019480e-04 >> com64 com65 com66 com67 com68 >> com69 com70 >> 2.395355e-04 2.307081e-04 4.019309e-04 6.874506e-05 1.417622e-04 >> 5.675463e-06 9.878848e-05 >> com71 com72 com73 com74 com75 >> com76 com77 >> 6.907251e-05 8.938528e-05 2.493585e-04 1.214151e-09 2.419942e-05 >> 1.183863e-04 7.457464e-05 >> com78 com79 com80 com81 com82 >> 6.284563e-05 1.741100e-04 2.128749e-04 2.920847e-06 9.368270e-05 >> >> $qual.FRic >> [1] 0.7035642 >> >> $FEve >> com1 com2 com3 com4 com5 com6 com7 >> com8 com9 >> 0.2388515 0.3996566 0.3350494 0.2943431 0.3576785 0.3846561 0.4319967 >> 0.5857688 0.4271764 >> com10 com11 com12 com13 com14 com15 com16 >> com17 com18 >> 0.3288544 0.4625139 0.4810921 0.3041395 0.5820621 0.6313595 0.5406627 >> 0.2707035 0.4530424 >> com19 com20 com21 com22 com23 com24 com25 >> com26 com27 >> 0.3015171 0.5790744 0.7253301 0.5441404 0.4481694 0.6187607 0.5445650 >> 0.4955940 0.5116752 >> com28 com29 com30 com31 com32 com33 com34 >> com35 com36 >> 0.5221560 0.5670513 0.4293040 0.4812907 0.4915317 0.3878949 0.4287726 >> 0.2893205 0.5835605 >> com37 com38 com39 com40 com41 com42 com43 >> com44 com45 >> 0.7896749 0.5482274 0.4015703 0.5990018 0.5431955 0.6251919 0.6023954 >> 0.4962892 0.3749658 >> com46 com47 com48 com49 com50 com51 com52 >> com53 com54 >> 0.4290664 0.4932756 0.5870607 0.3415984 0.3242199 0.4296702 0.4971491 >> 0.3272834 0.4865427 >> com55 com56 com57 com58 com59 com60 com61 >> com62 com63 >> 0.3428716 0.4653631 0.5479140 0.5698272 0.4777804 0.4525375 0.5916255 >> 0.4652363 0.4111973 >> com64 com65 com66 com67 com68 com69 com70 >> com71 com72 >> 0.3987632 0.3856989 0.3064660 0.4717288 0.3534531 0.4285679 0.6087836 >> 0.3607790 0.5494437 >> com73 com74 com75 com76 com77 com78 com79 >> com80 com81 >> 0.4214327 0.4360703 0.3808632 0.2833824 0.2876808 0.3380949 0.3421757 >> 0.2249389 0.6562824 >> com82 >> 0.6041267 >> >> $FDiv >> com1 com2 com3 com4 com5 com6 com7 >> com8 com9 >> 0.7423817 0.7458169 0.8679783 0.8226750 0.8373889 0.7877725 0.8070008 >> 0.7379254 0.8131881 >> com10 com11 com12 com13 com14 com15 com16 >> com17 com18 >> 0.7050804 0.6976598 0.7512530 0.6806472 0.6994011 0.7276620 0.7870732 >> 0.8793599 0.7562019 >> com19 com20 com21 com22 com23 com24 com25 >> com26 com27 >> 0.8983302 0.7681038 0.8163501 0.8198178 0.8489976 0.8922742 0.8442970 >> 0.8269863 0.7891795 >> com28 com29 com30 com31 com32 com33 com34 >> com35 com36 >> 0.7569559 0.8674167 0.7436638 0.7317634 0.9541561 0.7466859 0.7087626 >> 0.8006321 0.8511148 >> com37 com38 com39 com40 com41 com42 com43 >> com44 com45 >> 0.7729260 0.7509163 0.6905947 0.8466404 0.7677596 0.8791198 0.8211045 >> 0.7259760 0.7992553 >> com46 com47 com48 com49 com50 com51 com52 >> com53 com54 >> 0.7573869 0.8788377 0.9036087 0.8287276 0.7762280 0.8064715 0.7775368 >> 0.7828276 0.8151245 >> com55 com56 com57 com58 com59 com60 com61 >> com62 com63 >> 0.7503195 0.9213640 0.9141396 0.9150055 0.8348691 0.7271261 0.7875414 >> 0.8338675 0.7070272 >> com64 com65 com66 com67 com68 com69 com70 >> com71 com72 >> 0.7189990 0.7043998 0.7768710 0.7264939 0.8140790 0.7532290 0.7309884 >> 0.9190267 0.8540992 >> com73 com74 com75 com76 com77 com78 com79 >> com80 com81 >> 0.7531779 0.8520790 0.7649957 0.7319195 0.7578687 0.7915857 0.7600834 >> 0.7303097 0.7693079 >> com82 >> 0.7487281 >> >> $FDis >> com1 com2 com3 com4 com5 com6 >> com7 com8 >> 0.19178600 0.15352983 0.23419296 0.20315128 0.18604639 0.14348855 >> 0.28989249 0.25752544 >> com9 com10 com11 com12 com13 com14 >> com15 com16 >> 0.26174957 0.15962395 0.17907612 0.19642851 0.12827329 0.20114316 >> 0.18128942 0.25731184 >> com17 com18 com19 com20 com21 com22 >> com23 com24 >> 0.25855225 0.19576353 0.26366092 0.27728602 0.29546846 0.20720052 >> 0.27212077 0.30880887 >> com25 com26 com27 com28 com29 com30 >> com31 com32 >> 0.29440458 0.25396646 0.25647806 0.23422171 0.25464177 0.24311894 >> 0.16182038 0.09958014 >> com33 com34 com35 com36 com37 com38 >> com39 com40 >> 0.13095167 0.12983413 0.24224903 0.18239337 0.19817113 0.26320996 >> 0.11766508 0.30940641 >> com41 com42 com43 com44 com45 com46 >> com47 com48 >> 0.23583814 0.30624876 0.27750572 0.16747032 0.21445188 0.24327116 >> 0.20589103 0.27339261 >> com49 com50 com51 com52 com53 com54 >> com55 com56 >> 0.23614656 0.23678552 0.25641929 0.26260242 0.22516659 0.25243952 >> 0.23674896 0.18732040 >> com57 com58 com59 com60 com61 com62 >> com63 com64 >> 0.27202483 0.22947018 0.31342777 0.17997456 0.18461335 0.32429534 >> 0.14840674 0.13731830 >> com65 com66 com67 com68 com69 com70 >> com71 com72 >> 0.20437128 0.23298402 0.14830718 0.27194825 0.09289396 0.23196338 >> 0.17920946 0.25265696 >> com73 com74 com75 com76 com77 com78 >> com79 com80 >> 0.23525249 0.22171523 0.21972879 0.23523622 0.25336830 0.22477734 >> 0.20430806 0.20674064 >> com81 com82 >> 0.14270928 0.22673005 >> >> $RaoQ >> com1 com2 com3 com4 com5 com6 >> com7 com8 >> 0.05331536 0.03630438 0.07372825 0.06071274 0.05671961 0.05128404 >> 0.10541586 0.08965742 >> com9 com10 com11 com12 com13 com14 >> com15 com16 >> 0.09102682 0.04333067 0.04941515 0.05495308 0.03115535 0.06048519 >> 0.06070379 0.08680368 >> com17 com18 com19 com20 com21 com22 >> com23 com24 >> 0.07256118 0.05321952 0.08855815 0.10718949 0.10760039 0.07391960 >> 0.09163325 0.11476244 >> com25 com26 com27 com28 com29 com30 >> com31 com32 >> 0.10458183 0.08833300 0.07746703 0.07975863 0.08699710 0.07029682 >> 0.04116800 0.02091466 >> com33 com34 com35 com36 com37 com38 >> com39 com40 >> 0.03452371 0.03102533 0.07072961 0.04601163 0.05125527 0.08872861 >> 0.03608639 0.11227991 >> com41 com42 com43 com44 com45 com46 >> com47 com48 >> 0.07155343 0.10655043 0.09463142 0.04483107 0.05149290 0.06818611 >> 0.05776898 0.08787335 >> com49 com50 com51 com52 com53 com54 >> com55 com56 >> 0.06689262 0.06673575 0.07673498 0.08209786 0.06165892 0.07169030 >> 0.07207671 0.05351944 >> com57 com58 com59 com60 com61 com62 >> com63 com64 >> 0.10496706 0.07830439 0.11178032 0.05616672 0.04961674 0.11105321 >> 0.03840657 0.03693797 >> com65 com66 com67 com68 com69 com70 >> com71 com72 >> 0.05718178 0.07088485 0.03711119 0.08826702 0.02446860 0.08202483 >> 0.05274964 0.07232899 >> com73 com74 com75 com76 com77 com78 >> com79 com80 >> 0.06245748 0.05668243 0.06019524 0.07375344 0.07743079 0.06009721 >> 0.05757830 0.05642231 >> com81 com82 >> 0.03665132 0.06852237 >> >> $CWM >> trait1 trait2 trait3 trait4 >> trait5 >> com1 Demersal Marine, brackish, freshwater 3.361717 Invertebrate Feeder >> Browser >> com2 Demersal Marine, brackish, freshwater 3.391770 Invertebrate Feeder >> Browser >> com3 Demersal Marine, brackish, freshwater 3.389626 Invertebrate Feeder >> Browser >> com4 Demersal Marine, brackish, freshwater 3.437043 Invertebrate Feeder >> Browser >> com5 Demersal Marine, brackish, freshwater 3.450760 Invertebrate Feeder >> Browser >> com6 Demersal Marine, brackish, freshwater 3.354952 Invertebrate Feeder >> Browser >> com7 Demersal Marine, brackish, freshwater 3.389917 Invertebrate Feeder >> Browser >> com8 Demersal Marine, brackish, freshwater 3.382973 Invertebrate Feeder >> Browser >> com9 Demersal Marine, brackish, freshwater 3.371722 Invertebrate Feeder >> Browser >> com10 Demersal Marine, brackish, freshwater 3.371057 Invertebrate Feeder >> Browser >> com11 Demersal Marine, brackish, freshwater 3.389740 Invertebrate Feeder >> Browser >> com12 Demersal Marine, brackish, freshwater 3.416626 Invertebrate Feeder >> Browser >> com13 Demersal Marine, brackish, freshwater 3.348563 Invertebrate Feeder >> Browser >> com14 Demersal Marine, brackish, freshwater 3.310051 Invertebrate Feeder >> Browser >> com15 Demersal Marine, brackish, freshwater 3.274433 Invertebrate Feeder >> Browser >> com16 Demersal Marine, brackish, freshwater 3.366033 Invertebrate Feeder >> Browser >> com17 Pelagic Marine, brackish, freshwater 3.284144 Invertebrate Feeder >> Browser/Hunter >> com18 Demersal Marine, brackish, freshwater 3.352978 Invertebrate Feeder >> Browser >> com19 Demersal Marine, brackish, freshwater 3.313528 Invertebrate Feeder >> Browser >> com20 Demersal Marine, brackish, freshwater 3.368486 Invertebrate Feeder >> Browser >> com21 Demersal Marine, brackish, freshwater 3.346555 Invertebrate Feeder >> Browser >> com22 Demersal Marine, brackish, freshwater 3.348779 Invertebrate Feeder >> Browser >> com23 Demersal Marine, brackish, freshwater 3.316949 Invertebrate Feeder >> Browser >> com24 Demersal Marine, brackish, freshwater 3.332521 Invertebrate Feeder >> Browser >> com25 Demersal Marine, brackish, freshwater 3.398814 Invertebrate Feeder >> Browser >> com26 Demersal Marine, brackish, freshwater 3.281393 Invertebrate Feeder >> Browser >> com27 Demersal Marine, brackish, freshwater 3.325194 Invertebrate Feeder >> Browser >> com28 Demersal Marine, brackish, freshwater 3.356956 Invertebrate Feeder >> Browser >> com29 Demersal Marine, brackish, freshwater 3.282245 Invertebrate Feeder >> Browser >> com30 Demersal Marine, brackish, freshwater 3.263298 Invertebrate Feeder >> Browser >> com31 Demersal Marine, brackish, freshwater 3.304036 Invertebrate Feeder >> Browser >> com32 Demersal Marine, brackish 3.230522 Invertebrate Feeder >> Browser >> com33 Demersal Marine, brackish, freshwater 3.347002 Invertebrate Feeder >> Browser >> com34 Demersal Marine, brackish, freshwater 3.430373 Invertebrate Feeder >> Browser >> com35 Demersal Marine, brackish, freshwater 3.318061 Invertebrate Feeder >> Browser >> com36 Demersal Marine, brackish, freshwater 3.334512 Invertebrate Feeder >> Browser >> com37 Demersal Marine, brackish, freshwater 3.354938 Invertebrate Feeder >> Browser >> com38 Demersal Marine, brackish, freshwater 3.282320 Invertebrate Feeder >> Browser >> com39 Demersal Marine, brackish, freshwater 3.307719 Invertebrate Feeder >> Browser >> com40 Demersal Marine, brackish 3.343822 Invertebrate Feeder >> Browser >> com41 Demersal Marine, brackish, freshwater 3.347152 Invertebrate Feeder >> Browser >> com42 Demersal Marine, brackish, freshwater 3.389799 Invertebrate Feeder >> Browser >> com43 Demersal Marine, brackish, freshwater 3.400693 Invertebrate Feeder >> Browser >> com44 Demersal Marine, brackish, freshwater 3.421323 Invertebrate Feeder >> Browser >> com45 Demersal Marine, brackish, freshwater 3.329006 Invertebrate Feeder >> Browser >> com46 Demersal Marine, brackish, freshwater 3.316793 Invertebrate Feeder >> Browser >> com47 Benthic Marine, brackish, freshwater 3.309663 Invertebrate Feeder >> Browser >> com48 Demersal Marine, brackish, freshwater 3.372207 Invertebrate Feeder >> Browser >> com49 Benthic Marine, brackish, freshwater 3.332736 Invertebrate Feeder >> Browser >> com50 Benthic Marine, brackish, freshwater 3.311616 Invertebrate Feeder >> Browser >> com51 Demersal Marine, brackish, freshwater 3.319775 Invertebrate Feeder >> Browser >> com52 Demersal Marine, brackish, freshwater 3.277058 Invertebrate Feeder >> Browser >> com53 Demersal Marine, brackish, freshwater 3.354429 Invertebrate Feeder >> Browser >> com54 Demersal Marine, brackish, freshwater 3.339532 Invertebrate Feeder >> Browser >> com55 Demersal Marine, brackish, freshwater 3.357153 Invertebrate Feeder >> Browser >> com56 Benthic Marine, brackish, freshwater 3.279952 Invertebrate Feeder >> Browser >> com57 Benthic Marine, brackish 3.126602 Invertebrate Feeder >> Browser >> com58 Benthic Marine, brackish 3.217454 Invertebrate Feeder >> Browser >> com59 Demersal Marine, brackish 3.307770 Invertebrate Feeder >> Browser >> com60 Demersal Marine, brackish 3.252970 Invertebrate Feeder >> Browser >> com61 Demersal Marine, brackish, freshwater 3.404601 Invertebrate Feeder >> Browser >> com62 Pelagic Marine, brackish, freshwater 2.806229 Invertebrate Feeder >> Browser >> com63 Demersal Marine, brackish, freshwater 3.287427 Invertebrate Feeder >> Browser >> com64 Demersal Marine, brackish, freshwater 3.292238 Invertebrate Feeder >> Browser >> com65 Demersal Marine, brackish 3.265497 Invertebrate Feeder >> Browser >> com66 Demersal Marine, brackish, freshwater 3.317879 Invertebrate Feeder >> Browser >> com67 Demersal Marine, brackish 3.258586 Invertebrate Feeder >> Browser >> com68 Demersal Marine, brackish, freshwater 3.203772 Invertebrate Feeder >> Browser >> com69 Demersal Marine, brackish, freshwater 3.289830 Invertebrate Feeder >> Browser >> com70 Demersal Marine, brackish 3.326195 Invertebrate Feeder >> Browser >> com71 Benthic Marine, brackish, freshwater 3.325590 Invertebrate Feeder >> Browser >> com72 Benthic Marine, brackish, freshwater 3.297994 Invertebrate Feeder >> Browser >> com73 Demersal Marine, brackish, freshwater 3.331968 Invertebrate Feeder >> Browser >> com74 Demersal Marine, brackish, freshwater 3.395514 Invertebrate Feeder >> Browser >> com75 Demersal Marine, brackish, freshwater 3.323936 Invertebrate Feeder >> Browser >> com76 Demersal Marine, brackish, freshwater 3.201015 Invertebrate Feeder >> Browser >> com77 Demersal Marine, brackish, freshwater 3.280311 Invertebrate Feeder >> Browser >> com78 Demersal Marine, brackish, freshwater 3.318771 Invertebrate Feeder >> Browser >> com79 Demersal Marine, brackish, freshwater 3.318253 Invertebrate Feeder >> Browser >> com80 Demersal Marine, brackish, freshwater 3.374939 Invertebrate Feeder >> Browser >> com81 Demersal Marine, brackish, freshwater 3.440927 Invertebrate Feeder >> Browser >> com82 Demersal Marine, brackish, freshwater 3.381153 Invertebrate Feeder >> Browser >> trait6 >> com1 0.5 - 1.0 >> com2 1.0 - 2.0 >> com3 1.0 - 2.0 >> com4 1.0 - 2.0 >> com5 1.0 - 2.0 >> com6 1.0 - 2.0 >> com7 1.0 - 2.0 >> com8 1.0 - 2.0 >> com9 0.5 - 1.0 >> com10 1.0 - 2.0 >> com11 1.0 - 2.0 >> com12 1.0 - 2.0 >> com13 0.5 - 1.0 >> com14 0.5 - 1.0 >> com15 0.5 - 1.0 >> com16 0.5 - 1.0 >> com17 1.0 - 2.0 >> com18 0.5 - 1.0 >> com19 0.5 - 1.0 >> com20 0.5 - 1.0 >> com21 0.5 - 1.0 >> com22 0.5 - 1.0 >> com23 1.0 - 2.0 >> com24 1.0 - 2.0 >> com25 1.0 - 2.0 >> com26 1.0 - 2.0 >> com27 1.0 - 2.0 >> com28 0.5 - 1.0 >> com29 0.5 - 1.0 >> com30 0.5 - 1.0 >> com31 0.5 - 1.0 >> com32 0.5 - 1.0 >> com33 0.5 - 1.0 >> com34 1.0 - 2.0 >> com35 0.5 - 1.0 >> com36 0.5 - 1.0 >> com37 1.0 - 2.0 >> com38 0.5 - 1.0 >> com39 0.5 - 1.0 >> com40 0.5 - 1.0 >> com41 0.5 - 1.0 >> com42 1.0 - 2.0 >> com43 1.0 - 2.0 >> com44 1.0 - 2.0 >> com45 < 0.5 >> com46 < 0.5 >> com47 < 0.5 >> com48 < 0.5 >> com49 < 0.5 >> com50 < 0.5 >> com51 < 0.5 >> com52 0.5 - 1.0 >> com53 0.5 - 1.0 >> com54 < 0.5 >> com55 < 0.5 >> com56 < 0.5 >> com57 < 0.5 >> com58 < 0.5 >> com59 0.5 - 1.0 >> com60 0.5 - 1.0 >> com61 1.0 - 2.0 >> com62 1.0 - 2.0 >> com63 0.5 - 1.0 >> com64 0.5 - 1.0 >> com65 0.5 - 1.0 >> com66 0.5 - 1.0 >> com67 0.5 - 1.0 >> com68 0.5 - 1.0 >> com69 0.5 - 1.0 >> com70 0.5 - 1.0 >> com71 < 0.5 >> com72 < 0.5 >> com73 < 0.5 >> com74 1.0 - 2.0 >> com75 0.5 - 1.0 >> com76 0.5 - 1.0 >> com77 1.0 - 2.0 >> com78 0.5 - 1.0 >> com79 0.5 - 1.0 >> com80 1.0 - 2.0 >> com81 1.0 - 2.0 >> com82 1.0 - 2.0 >> >> 2016-02-22 13:58 GMT+00:00 stephen sefick <ssef...@gmail.com>: >> >>> If memory serves me, dbFD returns a lot of output. What do you want to >>> plot? Also, please provide reproducible examples, so that we can help you >>> solve your R related queries. >>> kindest regards, >>> >>> Stephen >>> >>> On Mon, Feb 22, 2016 at 7:00 AM, Fabio Monteiro < >>> fabio.monteiro1...@gmail.com> wrote: >>> >>>> Hi >>>> >>>> thank you for your quick answer >>>> >>>> I finally managed to insert everything correctly and dbFD is caltulated. >>>> >>>> I'm now trying to plot the results. >>>> >>>> My objects are matrices. >>>> >>>> x is a functional trait and species matrice. a is the species and >>>> samples >>>> >>>> Thank you >>>> >>>> 2016-02-22 12:19 GMT+00:00 PIKAL Petr <petr.pi...@precheza.cz>: >>>> >>>> > Hi >>>> > >>>> > comments inline >>>> > >>>> > > -----Original Message----- >>>> > > From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of >>>> Fabio >>>> > > Monteiro >>>> > > Sent: Monday, February 22, 2016 11:51 AM >>>> > > To: r-help@r-project.org >>>> > > Subject: [R] FD package >>>> > > >>>> > > Hi. >>>> > > >>>> > > First i would like to say that i'm really new in R. I recently >>>> started >>>> > > working with R and i'm using the FD package. >>>> > > >>>> > > I'm having some errors that doesn't make any sense. >>>> > > >>>> > > I have 2 matrix, one is the species with functional traits and the >>>> > > second one is the species and abundances. >>>> > >>>> > Your objects are matrices or data frames? From docs dbFD expects >>>> various >>>> > inputs byt they have to be properly formatted. >>>> > >>>> > > >>>> > > When I try to run the dbFD to calculate the functional diversity, >>>> the >>>> > > error is the number of species is different in x and a. >>>> > > >>>> > > I checked a lot of times and the number of species is the same and >>>> > > there are no mistakes in their names like spaces or caps. >>>> > >>>> > How did you checked? >>>> > >>>> > dim(trait) and dim(abund) >>>> > >>>> > shall give you the same number of rows in traits as columns in abund. >>>> > >>>> > If trait is vector, you need to use length instead of dim. >>>> > >>>> > > >>>> > > Can you help me? >>>> > >>>> > Without better description of your objects and code you used you >>>> hardly >>>> > get any answer. You can start by using examples from help page, which >>>> shall >>>> > work and see how your data differ from those examples. >>>> > >>>> > Cheers >>>> > Petr >>>> > >>>> > >>>> > > >>>> > > Fábio Monteiro >>>> > > >>>> > > [[alternative HTML version deleted]] >>>> > > >>>> > > ______________________________________________ >>>> > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >>>> > > https://stat.ethz.ch/mailman/listinfo/r-help >>>> > > PLEASE do read the posting guide http://www.R-project.org/posting- >>>> > > guide.html >>>> > > and provide commented, minimal, self-contained, reproducible code. >>>> > >>>> > ________________________________ >>>> > Tento e-mail a jakékoliv k němu připojené dokumenty jsou důvěrné a >>>> jsou >>>> > určeny pouze jeho adresátům. >>>> > Jestliže jste obdržel(a) tento e-mail omylem, informujte laskavě >>>> > neprodleně jeho odesílatele. 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Delete the contents of this e-mail with all attachments and >>>> its >>>> > copies from your system. >>>> > If you are not the intended recipient of this e-mail, you are not >>>> > authorized to use, disseminate, copy or disclose this e-mail in any >>>> manner. >>>> > The sender of this e-mail shall not be liable for any possible damage >>>> > caused by modifications of the e-mail or by delay with transfer of the >>>> > email. >>>> > >>>> > In case that this e-mail forms part of business dealings: >>>> > - the sender reserves the right to end negotiations about entering >>>> into a >>>> > contract in any time, for any reason, and without stating any >>>> reasoning. >>>> > - if the e-mail contains an offer, the recipient is entitled to >>>> > immediately accept such offer; The sender of this e-mail (offer) >>>> excludes >>>> > any acceptance of the offer on the part of the recipient containing >>>> any >>>> > amendment or variation. >>>> > - the sender insists on that the respective contract is concluded only >>>> > upon an express mutual agreement on all its aspects. >>>> > - the sender of this e-mail informs that he/she is not authorized to >>>> enter >>>> > into any contracts on behalf of the company except for cases in which >>>> > he/she is expressly authorized to do so in writing, and such >>>> authorization >>>> > or power of attorney is submitted to the recipient or the person >>>> > represented by the recipient, or the existence of such authorization >>>> is >>>> > known to the recipient of the person represented by the recipient. >>>> > >>>> >>>> [[alternative HTML version deleted]] >>>> >>>> ______________________________________________ >>>> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >>>> https://stat.ethz.ch/mailman/listinfo/r-help >>>> PLEASE do read the posting guide >>>> http://www.R-project.org/posting-guide.html >>>> and provide commented, minimal, self-contained, reproducible code. >>> >>> >>> >>> >>> -- >>> Stephen Sefick >>> ************************************************** >>> Auburn University >>> Biological Sciences >>> 331 Funchess Hall >>> Auburn, Alabama >>> 36849 >>> ************************************************** >>> sas0...@auburn.edu >>> http://www.auburn.edu/~sas0025 >>> ************************************************** >>> >>> Let's not spend our time and resources thinking about things that are so >>> little or so large that all they really do for us is puff us up and make us >>> feel like gods. We are mammals, and have not exhausted the annoying little >>> problems of being mammals. >>> >>> -K. Mullis >>> >>> "A big computer, a complex algorithm and a long time does not equal >>> science." >>> >>> -Robert Gentleman >>> >>> >> > > > -- > Stephen Sefick > ************************************************** > Auburn University > Biological Sciences > 331 Funchess Hall > Auburn, Alabama > 36849 > ************************************************** > sas0...@auburn.edu > http://www.auburn.edu/~sas0025 > ************************************************** > > Let's not spend our time and resources thinking about things that are so > little or so large that all they really do for us is puff us up and make us > feel like gods. We are mammals, and have not exhausted the annoying little > problems of being mammals. > > -K. Mullis > > "A big computer, a complex algorithm and a long time does not equal > science." > > -Robert Gentleman > > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
