Hi Giovanni, please follow Tutorial I, section 3 (particularly 3d, "Summary output of network analysis results") at http://labs.genetics.ucla.edu/horvath/CoexpressionNetwork/Rpackages/WGCNA/Tutorials/index.html . This will show you how to output module membership of each CpG into a file. If you want to assign different colors, you will have to do it yourself - first choose a set of colors (you will need at least 26), then you will need to write a simple R code to change the colors.
Best, Peter On Wed, Nov 18, 2015 at 3:31 AM, Calice Giovanni <giovanni.cal...@crob.it> wrote: > Hi all, > > I am using WGCNA for methylation level network construction e modules > detection. > In my network there are 26 modules with assigned colors and numeric labels, > id. > > Which Is the best way to reassign different color to each module? > > How to know the elements associated to each colored module in the cluster? > > > Thanks in advance, Regards > > Giovanni > > > Laboratory of Preclinical and Translational Research > IRCCS - CROB Oncology Referral Center of Basilicata - Italy > > Servizio di posta elettronica della Regione Basilicata "Powered By Microsoft > Exchange 2007" > Sito web istituzionale www.regione.basilicata.it ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
