Am 05.11.2015 um 15:44 schrieb Evan Cooch: > Well, sort of. I got sufficiently frustrated that I completely > uninstalled R, jags, and everything related. Did a re-install using only > versions of R nd JAGS found in the epel repo. No muss, no muss -- all > works. > > Out of curiosity, uninstalled again, and tried my usual sequence of > manually compile R from source, same with JAGS. R works, JAGS works, but > can't get any R package linking the two (say, rjags, R2jags), to > recognize that JAGS is installed. > > Ah well, at least the 'install from repos' approach works. I'll have to > make do with that.
Just took another look in my installation call, I made some time ago. What I did to get it work on FreeBSD was: R CMD INSTALL rjags_4-4.tar.gz --configure-args='CPPFLAGS="-fPIC" LDFLAGS="-L/usr/local/lib -ljags" --with-jags-include=/usr/local/include/JAGS --with-jags-lib=/usr/local/lib' So I used --configure-args, LDFLAGS, --with-jags-inlcue and --with-jags-lib in my installation procedure. Perhaps it is worth another try? ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
