Responding to my own post/question here.
Andy Liaw directed me to this page:
http://grokbase.com/t/r/r-help/05av0aaa2e/r-repost-examples-of-classwt-strata-and-sampsize-i-n-randomforest,
which gives an answer to my question.
----------------------------------- original post
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Date: Tue, 6 May 2014 22:54:22 -0700 (PDT)
From: Byron Dom <byron_...@yahoo.com>
To: "r-help@r-project.org" <r-help@r-project.org>
Subject: [R] Using unbalanced-learning algorithms in the randomForest
package.
Message-ID:
<1399442062.12706.yahoomail...@web142801.mail.bf1.yahoo.com>
Content-Type: text/plain
In archive: https://stat.ethz.ch/pipermail/r-help/2014-May/374384.html
The following report by the authors of the randomForest package describes two
different algorithm modifications for using random forests to learn classifiers
for "unbalanced" learning problems in which one class is much less frequent
than the other (in 2-class problems). These two variations are called "balanced
RF" and "weighted RF."
http://statistics.berkeley.edu/sites/default/files/tech-reports/666.pdf
Would someone please answer these three questions.
(1) Is it possible to use the R randomForest package to learn random forests
using either of these modified RF-learning algorithms?
(2) If it is possible, how does one do it?
(3) Is there some detailed documentation for running these modified versions?
I've read the R package manual but it's too sketchy. It seems to be primarily
for users who are already familiar with the package and just need to look up
some detail like the name of an argument.
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