HI,
May be this helps:
dat <- read.table(text="GENEID Chrom
2211 x
2200 y
2412 xy
2456 x
2476 het",sep="",header=TRUE,stringsAsFactors=FALSE)
subset(dat,Chrom=="x",select="GENEID")
# GENEID
#1 2211
#4 2456
A.K.
Hello
I have generated this script and got error in the subset line.
genes<- read.table("Malph.txt", header=TRUE, row.names=1, sep="\t")
subset(column=chrm,chrm=x)
write.table(res, file="Geneschrom.txt", quote=FALSE, sep="\t")
My data of genes is like this:
GENEID Chrom
2211 x
2200 y
2412 xy
2456 x
2476 het
I just want to print gene id with respect to chrom column.I want the gene ids
where chrom is x.
please help me
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