On 06/03/2014 09:51, Luca Cerone wrote:
Dear all,
I use R on a server on which I don't have administrative access.
I would like to update some of the R and Bioconductor packages I use
for my daily analysis,
however some of those packages are installed system-wide.
I would like to know how I can update those packages installing them
in my ~/R/ folder, and if this would cause any incompatibility.

So how can I get a list of packages that needs updating and force the
update to install them in my local folder?

It sounds like you want the 'instlib' argument to update.packages().

But if not, study the code of update.packages and modify to suit.

Thanks a lot in advance for all the help,

Cheers,
Luca

--
Brian D. Ripley,                  rip...@stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595

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