Hello Sarah, Thank you for the help very much.
Please kindly advise manuals dealing with the object list (or dist). In addition, I would like to show the beta diversity index in a map. Please kindly advise any other R package in need. Elaine On Wed, Jul 17, 2013 at 10:20 PM, Sarah Goslee <sarah.gos...@gmail.com>wrote: > Replied to on the R-sig-ecology list, with a request not to cross-post. > > Briefly, the output is a list with named components, so can be > extracted as usual. > > Sarah > > On Wed, Jul 17, 2013 at 5:50 AM, Elaine Kuo <elaine.kuo...@gmail.com> > wrote: > > Dear List, > > > > This is Elaine. > > I am using beta.part to calculate the beta diversity index. > > The function of beta.part can generate three kinds of beta diversity > indice > > at one time. > > However, it is Simpson index that I want. > > > > The calculation result is composed of three rows and N/A columns (dist > > class). > > I do not know how to extract one of the indice in the form of dist class. > > No relevant example is found the manual. > > (I tried as.vector as below but failed.) > > > > Please kindly help and thank you in advance. > > > > Elaine > > > > Code > > library(betapart) > > dist.sim<-beta.pair(dataR, index.family="sor") > > > > # Unfold distance matrices into vectors > > data.sim<-data.frame(as.vector(dist.sim)) > > > -- > Sarah Goslee > http://www.functionaldiversity.org > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
