What version of odfWeave and XML?
On Feb 18, 2013, at 11:49 AM, Paul Miller <pjmiller...@yahoo.com> wrote:
> Hi Max,
>
> Sorry I didn't provide sufficient information. Below is my sessionInfo with
> all code included.
>
> Thanks,
>
> Paul
>
> sessionInfo()
> R version 2.13.1 (2011-07-08)
> Platform: x86_64-pc-mingw32/x64 (64-bit)
> locale:
> [1] LC_COLLATE=English_United States.1252
> [2] LC_CTYPE=English_United States.1252
> [3] LC_MONETARY=English_United States.1252
> [4] LC_NUMERIC=C
> [5] LC_TIME=English_United States.1252
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>>
>> ##################
>> #### odfWeave ####
>> ##################
>>
>> .libPaths("C:/Users/pmiller/Documents/R/win-library/2.13")
>>
>> #### Set path to odt files ####
>>
>> fp <- "N:/Studies/HCRPC1211/Documentation/R Documentation/odfWeave
>> Documentation/Examples/Example 1/"
>>
>> #### Weave odt source file ####
>>
>> library(odfWeave)
> Loading required package: lattice
> Loading required package: XML
>> inFile <- paste(fp, "simple.odt", sep="")
>> outFile <- paste(fp, "output.odt", sep="")
>> odfWeave(inFile, outFile)
> Copying N:/Studies/HCRPC1211/Documentation/R Documentation/odfWeave
> Documentation/Examples/Example 1/simple.odt
> Setting wd to
> C:\Users\pmiller\AppData\Local\Temp\3\Rtmp2lSWXe/odfWeave18104355174
> Unzipping ODF file using unzip -o "simple.odt"
> Archive: simple.odt
> extracting: mimetype
> inflating: meta.xml
> inflating: settings.xml
> inflating: content.xml
> extracting: Thumbnails/thumbnail.png
> inflating: layout-cache
> inflating: manifest.rdf
> creating: Configurations2/popupmenu/
> creating: Configurations2/images/Bitmaps/
> creating: Configurations2/toolpanel/
> creating: Configurations2/statusbar/
> creating: Configurations2/toolbar/
> creating: Configurations2/progressbar/
> creating: Configurations2/menubar/
> creating: Configurations2/floater/
> inflating: Configurations2/accelerator/current.xml
> inflating: styles.xml
> inflating: META-INF/manifest.xml
> Removing simple.odt
> Creating a Pictures directory
> Pre-processing the contents
> Sweaving content.Rnw
> Writing to file content_1.xml
> Processing code chunks ...
> Error in parse(text = cmd) : <text>:1:40: unexpected '&'
> 1: paste(levels(iris$Species), collapse = &
> ^
>
>
> --- On Mon, 2/18/13, Max Kuhn <mxk...@gmail.com> wrote:
>
>
> From: Max Kuhn <mxk...@gmail.com>
> Subject: Re: [R] odfWeave: Trouble Getting the Package to Work
> To: "Paul Miller" <pjmiller...@yahoo.com>
> Cc: "r-help@r-project.org" <r-help@r-project.org>
> Received: Monday, February 18, 2013, 8:47 AM
>
>
>
> That's not a reproducible example. There is no sessionInfo() and you omitted
> code (where did 'fp' come from?).
>
>
> It works fine for me (see sessionInfo below) using the code in ?odfWeave.
>
>
> As for the file paths: you can point to different paths for the files
> (although don't change the working directory in the odt file). If you read
> the documentation for workDir: "a path to a directory where the source file
> will be unpacked and processed. If it does not exist, it will be created. If
> it exists, it should be empty, since all its contents will be included in the
> generated file". The default value should be sufficient.
>
>
> Max
>
>
>
>> sessionInfo()
> R version 2.15.2 (2012-10-26)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
>
> attached base packages:
> [1] grid stats graphics grDevices utils datasets methods
> base
>
>
> other attached packages:
> [1] MASS_7.3-22 odfWeave_0.8.2 XML_3.95-0.1 lattice_0.20-10
>
>
> loaded via a namespace (and not attached):
> [1] tools_2.15.2
>
>
>
>
>
>
>
> On Mon, Feb 18, 2013 at 8:52 AM, Paul Miller <pjmiller...@yahoo.com> wrote:
>
> Hello All,
>
> Have recently started learning Sweave and Knitr. Am now trying to learn
> odfWeave as well. Things went pretty smoothly with Sweave and Knitr but I'm
> having some trouble with odfWeave.
>
> My understanding was that odfWeave should work in pretty much the same way as
> Sweave. With odfWeave, you set up an input .odt file in a folder, run that
> file through the odfWeave function, and then the function produces an output
> .odt file in the same folder.
>
> So I decided to try that using a file called simple.odt that comes with the
> odfWeave package. Unfortunately, things didn't work out quite as I had hoped.
> Below is the result of my attempt to odfWeave that file via Emacs.
>
> For some reason, odfWeave is setting the wd to a location on the C drive when
> my input file is on the N drive. I tried altering this by setting the
> location of workDir to my folder on the N drive. odfWeave through up an error
> saying that this folder already exists. So perhaps the files are supposed to
> be processed in a location other than the one where the input file resides.
>
> The other thing is that odfWeave is finding an unexpected "&". There is text
> in the "simple.odt" input file that looks like "paste(levels(iris$Species),
> collapse = " but it has no "&". So presumably something is wrong in the xml
> markup that is being produced.
>
> If anyone can help me understand what is going wrong here, that would be
> greatly appreciated.
>
> Thanks,
>
> Paul
>
>> library(odfWeave)
> Loading required package: lattice
> Loading required package: XML
>> inFile <- paste(fp, "simple.odt", sep="")
>> outFile <- paste(fp, "output.odt", sep="")
>> odfWeave(inFile, outFile)
> Copying N:/Studies/HCRPC1211/Documentation/R Documentation/odfWeave
> Documentation/Examples/Example 1/simple.odt
> Setting wd to
> C:\Users\pmiller\AppData\Local\Temp\3\RtmpMlDMHV/odfWeave18071055703
> Unzipping ODF file using unzip -o "simple.odt"
> Archive: simple.odt
> extracting: mimetype
> inflating: meta.xml
> inflating: settings.xml
> inflating: content.xml
> extracting: Thumbnails/thumbnail.png
> inflating: layout-cache
> inflating: manifest.rdf
> creating: Configurations2/popupmenu/
> creating: Configurations2/images/Bitmaps/
> creating: Configurations2/toolpanel/
> creating: Configurations2/statusbar/
> creating: Configurations2/toolbar/
> creating: Configurations2/progressbar/
> creating: Configurations2/menubar/
> creating: Configurations2/floater/
> inflating: Configurations2/accelerator/current.xml
> inflating: styles.xml
> inflating: META-INF/manifest.xml
> Removing simple.odt
> Creating a Pictures directory
> Pre-processing the contents
> Sweaving content.Rnw
> Writing to file content_1.xml
> Processing code chunks ...
> Error in parse(text = cmd) : <text>:1:40: unexpected '&'
> 1: paste(levels(iris$Species), collapse = &
> ^
> [[alternative HTML version deleted]]
>
>
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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>
>
>
>
>
> --
>
> Max
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