On 01/28/2013 09:42 PM, Peverall Dubois wrote:
Is there any package that allow you to perform "MA plot" like graph
for Toray microarray data?


Unlike Affymetrix CEL file which contain 2 values (R and G),
Torray raw data only contain 1 value.

MA-plot is Affymetrix specific which usually available for in  (limma)
package.


Hi Peverall,
Have a look at "plotMA" in the limma package.

Jim

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