On 17/12/2012 11:03, Felipe Carrillo wrote:
> I did check that link but it doesn't do what I want..thanks for trying though.
>
>
> Felipe D. Carrillo
> Supervisory Fishery Biologist
> Department of the Interior
> US Fish & Wildlife Service
> California, USA
> http://www.fws.gov/redbluff/rbdd_jsmp.aspx
>
>
> From: arun <smartpink...@yahoo.com>
>> To: Felipe Carrillo <mazatlanmex...@yahoo.com>
>> Sent: Sunday, December 16, 2012 6:55 PM
>> Subject: Re: [R] save to file
>>
>> Hi,
>> sink() gives only the output to be saved in the "foo.txt", but txtStart(),
>> txtStop() gets the codes and the output. Sorry, I misunderstood your
>> question.
>>
>> You can also check this link (if you haven't already seen)
>> http://r.789695.n4.nabble.com/Capturing-R-console-output-into-a-file-sink-savehistory-td2227013.html
>> A.K.
>>
>>
>>
>>
>>
>> ________________________________
>> From: Felipe Carrillo <mazatlanmex...@yahoo.com>
>> To: arun <smartpink...@yahoo.com>
>> Sent: Sunday, December 16, 2012 9:47 PM
>> Subject: Re: [R] save to file
>>
>>
>> What you did That's what sink() does but I mean the entire R console screen
>> including the R statement below
>> I just want to be able to capture everything during the R session
>>
>> R version 2.15.0 (2012-03-30)
>> Copyright (C) 2012 The R Foundation for Statistical Computing
>> ISBN 3-900051-07-0
>> Platform: i386-pc-mingw32/i386 (32-bit)
>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>> You are welcome to redistribute it under certain conditions.
>> Type 'license()' or 'licence()' for distribution details.
>> Natural language support but running in an English locale
>> R is a collaborative project with many contributors.
>> Type 'contributors()' for more information and
>> 'citation()' on how to cite R or R packages in publications.
>> Type 'demo()' for some demos, 'help()' for on-line help, or
>> 'help.start()' for an HTML browser interface to help.
>> Type 'q()' to quit R.
>>
>> Felipe D. Carrillo
>> Supervisory Fishery Biologist
>> Department of the Interior
>> US Fish & Wildlife Service
>> California, USA
>> http://www.fws.gov/redbluff/rbdd_jsmp.aspx
>>
>>
>>
>> From: arun <smartpink...@yahoo.com>
>>> To: Felipe Carrillo <mazatlanmex...@yahoo.com>
>>> Sent: Sunday, December 16, 2012 6:37 PM
>>> Subject: Re: [R] save to file
>>>
>>> Hi,
>>> I am using Ubuntu 12.04.
>>>
>>> My sessionInfo() if that helps:
>>> sessionInfo()
>>> R version 2.15.0 (2012-03-30)
>>> Platform: x86_64-pc-linux-gnu (64-bit)
>>>
>>> locale:
>>> [1] LC_CTYPE=en_US.UTF-8
>> LC_NUMERIC=C
>>> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
>>> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
>>> [7] LC_PAPER=C LC_NAME=C
>>> [9] LC_ADDRESS=C LC_TELEPHONE=C
>>> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>>>
>>> attached base packages:
>>> [1] stats graphics grDevices utils datasets
>> methods base
>>> other attached packages:
>>> [1] TeachingDemos_2.8 stringr_0.6 reshape_0.8.4 plyr_1.7.1
>>>
>>> loaded via a namespace (and not attached):
>>> [1] tcltk_2.15.0 tools_2.15.0
>>> A.K.
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> ________________________________
>>> From: Felipe Carrillo <mazatlanmex...@yahoo.com>
>>> To: arun <smartpink...@yahoo.com>
>>> Sent: Sunday, December 16, 2012 9:28 PM
>>> Subject: Re: [R] save to file
>>>
>>>
>>> My text file is created but its empty. Did you start
>>> library(TeachingDemos)
>>> txtStart("foo.txt",commands=TRUE,results=TRUE,append=FALSE)
>>> on you R.profile to capture the R statement?
>>>
>>> Felipe D.
>> Carrillo
>>> Supervisory Fishery Biologist
>>> Department of the Interior
>>> US Fish & Wildlife Service
>>> California, USA
>>> http://www.fws.gov/redbluff/rbdd_jsmp.aspx
>>>
>>>
>>>
>>> From: arun <smartpink...@yahoo.com>
>>>> To: Felipe Carrillo <mazatlanmex...@yahoo.com>
>>>> Sent: Sunday, December 16, 2012 6:16 PM
>>>> Subject: Re: [R] save to file
>>>>
>>>>
>>>>
>>>> Hi,
>>>> If there are comments in your code, you need to ?txtComment() from
>>>> library(TeachingDemos). I did a trial run and was able to get the
>>>> snapshot in the output file.
>>>>
>>>> A.K.
>>>>
>>>>
>>>> ________________________________
>>>> From: Felipe Carrillo
>>> <mazatlanmex...@yahoo.com>
>>>> To: arun <smartpink...@yahoo.com>
>>>> Sent: Sunday, December 16, 2012 9:13 PM
>>>> Subject: Re: [R] save to file
>>>>
>>>>
>>>> I know about sink() and capture.output() but these functions don't capture
>>>> the entire console. I basically
>>>> want a snapshot of all the text on the R console saved to a file. I am the
>>>> users to send me the file so that I can
>>>> see where the R crashed. I will check the Teaching Demos. Thanks
>>>>
>>>> Felipe D. Carrillo
>>>> Supervisory Fishery Biologist
>>>> Department of the Interior
>>>> US Fish & Wildlife Service
>>>> California, USA
>>>> http://www.fws.gov/redbluff/rbdd_jsmp.aspx
>>>>
>>>>
>>>>
>>>> From: arun <smartpink...@yahoo.com>
>>>>> To: Felipe Carrillo <mazatlanmex...@yahoo.com>
>>>>> Cc: R help <r-help@r-project.org>
>>>>> Sent: Sunday, December 16, 2012 6:07 PM
>>>>> Subject: Re: [R] save to file
>>>>>
>>>>> HI,
>>>>>
>>>>> I guess ?sink() may not work for you as you need the whole R console.
>>>>>
>>>>> Have you tried library(TeachingDemos) ?txtStart(), ?txtStop()
>>>> ?
>>>>> txtStart("foo.txt",commands=TRUE,results=TRUE,append=FALSE)
>>>>> <codes>
>>>>> txtStop()
>>>>>
>>>>> A.K.
>>>>>
>>>>>
>>>>>
>>>>> ----- Original Message -----
>>>>> From: Felipe
>> Carrillo <mazatlanmex...@yahoo.com>
>>>>> To: "r-h...@stat.math.ethz.ch" <r-h...@stat.math.ethz.ch>
>>>>> Cc:
>>>>> Sent: Sunday, December 16, 2012 8:30 PM
>>>>> Subject: [R] save to file
>>>>>
>>>>> Hi,
>>>>> What's the equivalent of "Save to File" from the R console File menu on
>>>>> an R routine? Just trying
>>>>> to capture the whole R console into a text file when my code fails.
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> Felipe D. Carrillo
>>>>> Supervisory Fishery Biologist
>>>>> Department of the Interior
>>>>> US Fish & Wildlife Service
>>>>> California,
>>>> USA
>>>>> http://www.fws.gov/redbluff/rbdd_jsmp.aspx
>>>>>
>>>>>
>>> [[alternative HTML version deleted]]
>>>>>
>>>>> ______________________________________________
>>>>> R-help@r-project.org mailing list
>>>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>>>> PLEASE do read the posting guide
>>>>> http://www.R-project.org/posting-guide.html
>>>>> and provide commented, minimal, self-contained, reproducible code.
>>>>>
>>>>>
>>>>>
>>>>>
>>>>
>>>>
>>>
>>>
>>
>>
> [[alternative HTML version deleted]]
>
>
>
> ______________________________________________
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
one workaround could be to use a 'tee' in case of linux/unix.
Example: ssh username@R-server |tee log.txt
so this could save your entire session in the log.txt file.
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
