Here follows also the Sys.getenv(): R Windwos 32bit Rgui run: ======================
R_HOME "D:/RHome" R_LIBS_USER "C:\\Users\\aldi\\Documents/R/win-library/2.15" R_USER "C:\\Users\\aldi\\Documents" R cygwin run: =========== > Sys.getenv() "/usr/bin/R" BIBINPUTS ".;;D:/RHome/share/texmf/bibtex/bib;" BSTINPUTS ".;;D:/RHome/share/texmf/bibtex/bst;" R_ARCH "/i386" R_BZIPCMD "bzip2" R_DOC_DIR "D:/RHome/doc" R_GZIPCMD "gzip" R_HOME "D:/RHome" R_INCLUDE_DIR "D:/RHome/include" R_LIBS_USER "D:\\cygwin\\home\\aldi/R/win-library/2.15" R_OSTYPE "windows" R_PAPERSIZE "a4" R_RD4PDF "times,inconsolata,hyper" R_SHARE_DIR "D:/RHome/share" R_UNZIPCMD "unzip" R_USER "D:\\cygwin\\home\\aldi" R_ZIPCMD "zip" SESSIONNAME "Console" SHELL "/bin/bash" TEXINPUTS ".;;D:/RHome/share/texmf/tex/latex;" > library(rgenoud) Error in library(rgenoud) : there is no package called 'rgenoud' Execution halted Thanks, Aldi On 10/16/2012 12:33 PM, Aldi Kraja wrote > Thank you Richard and Jeff, > There is a difference in the reporting of extra packages in 32bit 64bit, > see following: > 32bit although it does not report the extra package when I call it with > Rgui it has the rgenoud. > Instead 64bit Rgui it reports that extra package of rgenoud. > > More info follows: (in cygwin) > > sessionInfo() > R version 2.15.1 (2012-06-22) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=English_United States.1252 > [2] LC_CTYPE=English_United States.1252 > [3] LC_MONETARY=English_United States.1252 > [4] LC_NUMERIC=C > [5] LC_TIME=English_United States.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > library(rgenoud) > Error in library(rgenoud) : there is no package called 'rgenoud' > Execution halted > > *More info in windows:**(64 bit)* > > sessionInfo() > R version 2.15.1 (2012-06-22) > Platform: x86_64-pc-mingw32/x64 (64-bit) > > locale: > [1] LC_COLLATE=English_United States.1252 > [2] LC_CTYPE=English_United States.1252 > [3] LC_MONETARY=English_United States.1252 > [4] LC_NUMERIC=C > [5] LC_TIME=English_United States.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] rgenoud_5.7-8 > > *More info in windows (32 bit):* > > sessionInfo() > R version 2.15.1 (2012-06-22) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=English_United States.1252 > [2] LC_CTYPE=English_United States.1252 > [3] LC_MONETARY=English_United States.1252 > [4] LC_NUMERIC=C > [5] LC_TIME=English_United States.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > > library(rgenoud) > ## rgenoud (Version 5.7-8, Build Date: 2012-06-03) > ## See http://sekhon.berkeley.edu/rgenoud for additional documentation. > ## Please cite software as: > ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011. > ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.'' > ## Journal of Statistical Software, 42(11): 1-26. > ## > > > > > > > > On 10/16/2012 12:23 PM, Richard M. Heiberger wrote: >> I would guess that you installed rgenoud as user, not as >> administrator. That would put the >> file inside >> c:/Users/YourName/AppData/Local/VirtualStore/Program Files/R >> instead of where you think it is. I can imagine that could easily >> cause confusion. >> >> Rich >> >> On Tue, Oct 16, 2012 at 1:14 PM, Aldi Kraja <a...@wustl.edu >> <mailto:a...@wustl.edu>> wrote: >> >> Thank you Duncan, >> >> No I did not install R from cygwin. R is installed with windows 7. >> I am calling R with a symbolic link from /usr/bin part of cygwin >> paths, but my symbolic link is pointing to /usr/bin/R -> >> /cygdrive/d/RHome/bin/R.exe >> >> Is it possible R is lost in forward paths recognized by cygwin? >> >> You are right I need to test further. Thought someone would have >> had this experience and a solution from previous work. >> >> Aldi >> >> On 10/16/2012 11:51 AM, Duncan Murdoch wrote: >> >> On 16/10/2012 12:41 PM, Aldi Kraja wrote: >> >> Hi, >> Using R 2.15.1 on Windows 7. Have installed both versions >> 32 and 64bit. >> In both of them among others I have installed a package >> rgenoud >> When I open R gui of 32bit and write library(rgenoud) it >> responds by >> showing a functional rgenoud version 5.7-8. The same it >> does on Rgui >> 64bit. >> >> Now I am working in cygwin (v. 1.12.4.0) with xwin. >> Normally before when >> I had installed a package, I only had to call the library >> with the name >> of the package and R will find the right one to load. >> >> Now when I apply R CMD BATCH script1.R out1.txt, under >> cygwin the first >> thing it reports: >> >> R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows" >> After some generalities it reports >> >library(rgenoud) >> Error in library(rgenoud) : there is no package called >> 'rgenoud' >> Execution halted >> >> So my question is why under cygwin in a batch mode, it >> does not find the >> installed package, which is already installed in my >> laptop's R? >> >> >> I think you'll need to debug this yourself, since you haven't >> given us much to work with. My guess would be that you have a >> different path so you're finding a different R, but it could >> be something else. (You aren't using the R distributed by >> Cygwin, are you? That one doesn't work. I don't know who put >> it into the Cygwin distribution, but they obviously didn't >> test it.) >> >> Duncan Murdoch >> >> >> ______________________________________________ >> R-help@r-project.org <mailto:R-help@r-project.org> mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> >> > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
