Hello,
#install.packages('sos') # do this,
library(sos) # it would have saved you hours.
r1 <- findFn('sam')
r2 <- findFn('bam')
r1 & r2
Number one. Genomic alignment file formats.
Hope this helps,
Rui Barradas
Em 10-08-2012 11:10, peter dalgaard escreveu:
On Aug 10, 2012, at 08:24 , mengxin wrote:
Hi all:
I've got a data of ".bam" which is created from my partner under linux sysyem.
My system is window xp, and I wanna know how to read the .bam file.
An what is the .bam file supposed to contain? You are really not giving us much
of a clue, are you?
I'd venture a guess that it is something with genomic alignment files, in which case you need to
see the Bioconductor folks over on their mailing lists. However, it could be a multitude of other
things, like "Bob's Adlib Music" of "Bravo Archived Media"...
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
