Hi all –
I am a newbie to R and have had a terrible time trying to figure out how to set
up an analysis. I have installed and loaded the appropriate package
(phyloclim), but I do not even know where to begin defining one of the
arguments.
The usage for the command I’m trying to perform is:
niche.equivalency.test(spec, n, maxent, mx = 2000)
where the argument…
maxent is a list containing the location of the MAXENT application and its
input files (see below)
>From what I have gathered, the maxent argument is a list of four elements:
app the path to the MAXENT application (MAXENT is a JAVA program)
samples the path to a SWD-formatted file with sample points (e.g.,
samples.csv)
background the path to a SWD-formatted file with background points (e.g.,
background.csv)
projections the path to a folder containing environmental GIS layers to be
used for projection of the MAXENT models
Suppose all of these files are placed into the directory
“C:\Users\hendrb\Desktop\Niche_Overlap”. Can anyone show me the syntax for
setting up the maxent argument?
I sincerely appreciate any help you can provide.
Regards,
Brent
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