On Wed, 6 Jun 2012, Prof Brian Ripley wrote:

On 06/06/2012 16:13, niandra wrote:
Hi all,

I have a problem with the library R2BayesX, when i try to use the command
bayesx i get this error:
dyld: Library not loaded: /usr/local/lib/libreadline.5.2.dylib
   Referenced from:
/Library/Frameworks/R.framework/Versions/2.15/Resources/library/BayesXsrc/libs/i386/BayesX
   Reason: image not found

So your R installation on your unstated OS is incomplete/corrupt.

It looks like this is OS X, so:

- wrong list (use R-sig-mac)
- you need to tell the correct list a lot more, including the 'at a minimum' information asked for in the R posting guide (see below), and how you installed R. - a possible answer is to install http://r.research.att.com/src/readline-5.2.tar.gz : see the OS X documentation.

Thanks, Brian, I wasn't aware of that (because I am not an OS X user). I had recently seen this problem on another OS X machine. There, we solved it by

install.packages("BayesXsrc", type = "source")

so that the BayesX binary would be linked against the libreadline that was available on that machine.

thx,
Z

I obtain this message also with the example in the bayesx help:

## generate some data
set.seed(111)
n<- 200

## regressor
dat<- data.frame(x = runif(n, -3, 3))

## response
dat$y<- with(dat, 1.5 + sin(x) + rnorm(n, sd = 0.6))

## estimate models with
## bayesx REML and MCMC
b1<- bayesx(y ~ sx(x), method = "REML", data = dat)
dyld: Library not loaded: /usr/local/lib/libreadline.5.2.dylib
   Referenced from:
/Library/Frameworks/R.framework/Versions/2.15/Resources/library/BayesXsrc/libs/i386/BayesX
   Reason: image not found
Total run time was: 0.69 sec

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--
Brian D. Ripley,                  rip...@stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595

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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

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