Hello,
I'm having a question related to the system command within R: I try to
evoke a perl script from within R with something like
system(paste('perl myscript.pl', some parameters ....,sep=" ")
This works just fine as long as I do not use any additionally installed
Perl module, as this leads to a
"Can't locate Statistics/Descriptive.pm in @INC ....."
This is most likely due to the fact that there are somehow two Perls on my
Mac OS X (one must have come through my trials playing with Macports), one
is the Perl that came with the system.
What I do not get, is that I can run the script from the command line
without a problem.
How can I make R aware of "the other" @INC?
In the terminal, I find Perl to be in
/opt/local/bin/Perl
the above module is accordingly in
/opt/local/lib/perl5/site_perl/5.8.9/Statistics/Descriptive.pm
In contrast, running the Perl script from within R, it tries to find the
modules in /System/Library/Perl/5.10.0/...
I see that this is not necessarily a pure R question, but as it occurs
specifically using the R system command I thought there might be someone
around here who came across similar problems!
Best wishes
Maxim
[[alternative HTML version deleted]]
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
