I was playing around with the ghyp package and simulated series of t-distributed variables when suddenly i was not able to reproduce the log likelihood values reported by the package. When trying to reproduce the likelihood values, I summed the log(dt(x,v)) values and it worked with some simulated series but not all.
Is there any obvious flaws with this script? library("ghyp") series_1=rt(10000,4) #simulating 10000 relation of student t variables with df=4 #Which implies a standrad deviation equal to sqrt(2) series_2=series_1/sqrt(2)*5 #To get student t distributed variabler with standard #deviation equal to 5 I rescale the first series #When i check the first series with the ghyp package, the result coincides with #the sum of log likelihood calculated with dt(x, df, ncp, log = FALSE) fit_1=fit.tuv(series_1, silent=T, symmetric=T) fit_1 sum(log(dt(series_1,coef(fit_1)$nu,0))) #The two log likelihood estimates is approximatly equal, and the parameters are #sensible. #When I check series 2, i get a very different result. The estimate for mu and nu #is still sensible, but the log likelihood is very different from what i get with #dt(x, df, ncp, log = FALSE) fit_2=fit.tuv(series_2, silent=T, symmetric=T) fit_2 sum(log(dt(series_2,coef(fit_2)$nu,0))) #This is very different -- View this message in context: http://r.789695.n4.nabble.com/Problem-with-reproducing-log-likelihood-estimated-with-ghyp-package-tp4207833p4207833.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.