Dear all,
concerne to my issue, I obtained different results between ANOVA and LSD
TEST (agricolae package), and I ask me why
>anova <- aov(SS ~ Treatment*Lot)
>summary(anova)
Df Sum Sq Mean Sq F value Pr(>F)
Treatment 7 0.0000534 7.622e-06 1.107 0.374
Lot 2 0.0000059 2.954e-06 0.429 0.654
Treatment:Lot 14 0.0001038 7.412e-06 1.077 0.401
Residuals 48 0.0003304 6.883e-06
> LSD.test(anova, "Treatment")
Study:
LSD t Test for SS
Mean Square Error: 6.883013e-06
Trattamento, means and individual ( 95 %) CI
SS std.err replication LCL UCL
A30 0.02966558 0.0019037856 9 0.02583776 0.03349340
AM 0.02844520 0.0005186885 9 0.02740230 0.02948809
C30 0.02913658 0.0006792219 9 0.02777092 0.03050225
CM 0.02964944 0.0005398926 9 0.02856391 0.03073496
T30 0.02979624 0.0006920447 9 0.02840479 0.03118769
TS 0.02891764 0.0004981543 9 0.02791603 0.02991924
V30 0.03112188 0.0005157621 9 0.03008487 0.03215889
VM 0.03087886 0.0006874520 9 0.02949664 0.03226107
alpha: 0.05 ; Df Error: 48
Critical Value of t: 2.010635
Least Significant Difference 0.002486659
Means with the same letter are not significantly different.
Groups, Treatments and means
a A1 0.03112188
ab A2 0.03087886
ab B1 0.02979624
ab C1 0.02966558
ab D1 0.02964944
ab D2 0.02913658
ab B2 0.02891764
b C2 0.0284452
how is it possible? my mistake to set anova?
Best regards,
Roberto
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