Dear all, I have a question about time-dependent covariates in a coxph model. Specifically I am wondering whether it is possible to give more recent events a higher weight when constructing time-dependent covariates.
Assume I have a sample of cancer patients and I would like to predict whether the number of treatments a patient received has an impact on survival time. For each patient in my sample I know (a) the date when a patient is diagnosed with cancer, (b) all the dates where a treatment took place and (c) the date of death or, alternatively, the date where the observation window ends. Take the following example: Bob is diagnosed with cancer on 01/01/1990, has three treatments (on 01/01/1993, 01/01/1995 and 01/01/1997) and dies on 01/01/1999. In order to incorporate the time-dependent covariates into my model, I transform this into four separate datapoints: (1) Start: 01.01.1990, End: 01.01.1993, Number of treatments: 0 (2) Start: 01.01.1993, End: 01.01.1995, Number of treatments: 1 (3) Start: 01.01.1995, End: 01.01.1997, Number of treatments: 2 (4) Start: 01.01.1997, End: 01.01.1999, Number of treatments: 3 The problem is that in this formulation all treatments count the same way, no matter when they took place. I would like to introduce some form of discount factor that takes account of the fact that the potential impact of each treatment decays over time. If that discount factor is d, I would like to model the following four datapoints: (1) Start: 01.01.1990, End: 31.12.1992, Number of treatments: 0 (2) Start: 01.01.1993, End: 31.12.1994, Number of treatments: 1 (3) Start: 01.01.1995, End: 31.12.1996, Number of treatments: 1*d^2 + 1 (4) Start: 01.01.1997, End: 01.01.1999, Number of treatments: 1*d^4 + 1*d^2 + 1 d^n hereby accounts for the fact that the treatment was already n years ago at the start of the observation. My question: Is it possible to include such a formulation in a coxph model? Is there a way to estimate the optimal d, so that I can estimate how fast the effect of a treatment decays over time, given the data I have? Thanks, Michael [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.