On Tue, Oct 4, 2011 at 4:41 PM, Gavin Simpson <gavin.simp...@ucl.ac.uk> wrote: > On Tue, 2011-10-04 at 08:45 +0000, Ashley Houlden wrote: >> Hi, > <snip /> >> #distance matrix of samples using bray curtis >> d= bcdist(mydata, rmzero=FALSE) > > In addition, you don't necessarily need ecodist for the bray curtis > distance. vegdist() in vegan will compute this for you. > > Not that there is anything wrong with ecodist I hasten to add - just > that you can do this all in vegan if you wanted.
Because ecodist is awesome. :) But there's no need to mix and match; vegan and ecodist do many of the same things (for historical reasons). Sarah -- Sarah Goslee http://www.functionaldiversity.org ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
