Hi R experts, I'm looking for some help with plotting vectors from envfit in vegan, onto a 3d plot using ordiplot3d. So far I have
data.mds <- metaMDS(data, k=3,trace = FALSE) vect_data<-envfit(data.mds,vegdata[,3:21],choices=1:3,permu=9999) ordiplot3d(data.mds,envfit=vect_data) ordixyplot(data.mds,pch=pts,envfit=vect_data) (my data's not really called data, I thought it might be easier to communicate this way) These display the vectors as arrows, but what I would really like is for the arrows to be labelled, like what comes up automatically in ordirgl or with a 2D ordiplot. I've gone through the help and tried everything I can work out, but I must be missing something important, because nothing's worked so far. I would be happy to use ordixyplot and show a series of 2D plots, but I can't get labels on those arrows either. Any pointers in the right direction would be gratefully received. Briony -- View this message in context: http://r.789695.n4.nabble.com/envfit-vector-labels-with-ordiplot3d-tp3800669p3800669.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
