I have had the same problem. It seems that you need to configure the make option with a file. Create a file, ~/.R/Makevars, and insert "LDFLAGS=-L/share/apps/HDF5/lib" (in your case) into it. It solved my problem.
______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
