Hi everyone,
I am trying to find a way to filter a table; If I am given for example the
following table:
> head(intra)
chr miRNA start end strand ACC hsa_ID
region region_start region_end gene_id transcrip_id
1 chr1 miRNA 1102484 1102578 + ACC="MI0000342"; ID="hsa-mir-200b";
exon 1102484 1102578 NR_029639 NR_029639
2 chr1 miRNA 1103243 1103332 + ACC="MI0000737"; ID="hsa-mir-200a";
exon 1103243 1103332 NR_029834 NR_029834
3 chr1 miRNA 1104385 1104467 + ACC="MI0001641"; ID="hsa-mir-429";
exon 1104385 1104467 NR_029957 NR_029957
4 chr1 miRNA 3044539 3044599 + ACC="MI0015861"; ID="hsa-mir-4251";
exon 3044539 3044599 NR_036215 NR_036215
5 chr1 miRNA 3477260 3477354 - ACC="MI0003556"; ID="hsa-mir-551a";
exon 3477260 3477354 NR_030277 NR_030277
6 chr1 miRNA 6489894 6489956 - ACC="MI0015864"; ID="hsa-mir-4252";
exon 6489894 6489956 NR_036218 NR_036218
I would only like to keep in the table the rows that have intra$start !=
intra$region_start and intra$end != intra$region_end.
I've tried using this but I get the following error:
> intra<- intra[(intra$start != intra$region_start )&&(intra$end !=
intra$region_end)]
> head(intra)
data frame with 0 columns and 6 rows
Thank you,
best,
Nanami
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