On Mon, Apr 18, 2011 at 9:12 AM, Jim Silverton <jim.silver...@gmail.com> wrote: > I am using storey's qvalue package but I keep on getting errors. Why is > this? > >> qvalue(p, lambda=0.5)$pi0 > [1] "ERROR: p-values not in valid range." > Error in qvalue(p, lambda = 0.5)$pi0 : > $ operator is invalid for atomic vectors
Some of your p-values are likely outside the range [0, 1]. In such cases the function prints out the error message and returns a single number 0. Trying to take a component of a single number produces the second error message you see. Check your p-values - all need to be finite and within the range [0, 1]. HTH, Peter ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
