Hi,
I had 10000 genes, and I clustered them using K-means clustering in R.
kc<-kmeans(data.sub,7)
kc
n cluster sum of squares by cluster:
[1] 60631.76 135886.19 159049.71 101783.27 90040.72 183335.60 158867.81
Available components:
[1] "cluster" "centers" "withinss" "size"
I am very new to R. How do i measure the distance between those cluster?
I tried
I am trying to do a complete linkage
>z<-hclust(kc,method="complete")
Error in if (n < 2) stop("must have n >= 2 objects to cluster") :
argument is of length zero
thanks.
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