Hi Harold: I know the outputs are different between SAS and R, but the results that I got have big difference.
Here is part of the result based on the SAS code I provided earlier: Cov Parm Subject Estimate Error Value Pr > Z UN(1,1) team 177.53 273.66 0.65 0.2583 Residual 2161.15 67.1438 32.19 <.0001 Solution for Fixed Effects Standard Effect pairs grade school Estimate Error DF t Value Pr > |t| Intercept 638.82 4.6127 5 138.49 <.0001 trt -0.2955 3.4800 5 -0.08 0.9356 pairs 1 0.1899 7.1651 5 0.03 0.9799 pairs 2 31.1293 6.0636 5 5.13 0.0037 . . . In R: library(lme4) mixed<- lmer(Pre~trt+pairs+grade+school+(1|team), test) result: Random effects: Groups Name Variance Std.Dev. team (Intercept) 568.61 23.846 Residual 2161.21 46.489 Fixed effects: Estimate Std. Error t value (Intercept) 540.402 43.029 12.559 trt 7.291 13.084 0.557 pairs -3.535 6.150 -0.575 In random effect, the variance of team in SAS is 177.53, but it is 568.61 in R. Also I have negative estimate for trt in SAS but positive estimate for trt in R. I am wondering how this happened, and how can I solve this problem so that I can get similar result from both software. Also does R provides result for fixed effect of each level? For example, the result of pair1, pair2,pair3,..., and grade1, grade2, grade3,... -- View this message in context: http://r.789695.n4.nabble.com/HLM-Model-tp3242999p3243475.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.