Dear r-help,
I took your advice into consideration and i tried to solve my errors. But ,
when I use the command R CMD check namepackage, I find an error in this file
C:/Rpack/namepackage.Rcheck/00check.txt :
* using log directory 'C:/Rpack/namepackge.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* checking for file 'namepackge/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'namepackge' version '1.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking for executable files ... OK
* checking whether package 'namepackge' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ...
OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... ERROR
Running examples in 'namepackge-Ex.R' failed.
The error most likely occurred in:
> ### * RT
>
> flush(stderr()); flush(stdout())
>
> ### Name: RT
> ### Title: modeling
> ### Aliases: RT
> ### Keywords: programming models
>
> ### ** Examples
>
> data(d)
> data <- d
> RT(t(d), c(2,2,2), c(1,2,3),c("V1","V2","V3"))
Error in text.default(x, y, labels = labels, col = label.color, family =
label.family, :
family 'serif' not included in PostScript device
Calls: RT-> plot -> plot.igraph -> text -> text.default
Execution halted
Best Regards,
2010/8/19, Michael Dewey <i...@aghmed.fsnet.co.uk>:
>
> At 13:57 19/08/2010, anderson nuel wrote:
>
>> Dear r-help,
>>
>> I don't use namespace.
>>
>
> Well, as I said in my original reply, it would be a good idea to do so.
>
>
>> How can I make asia available?
>>
>
> Without knowing where asia is that is quite a tough call. How do you access
> it when you test your code before you try to package it?
>
>
>> I think my problem in creating the package in this: I have a singleglobal
>> function (RT) in my package, but inside RT I need to call several other
>> function( comb l,earn_comb, nchoo). When I used package.sekeleton, Iput in
>> lists all the functions(comb l,earn_comb, nchoo,RT),but in the 'man' I
>> left
>> only namepackage-package.Rd and RT.Rd. When I did do this, is it true??
>>
>>
>> Best Regards
>>
>>
>> 2010/8/18, Michael Dewey <<mailto:i...@aghmed.fsnet.co.uk>
>> i...@aghmed.fsnet.co.uk>:
>>
>> At 10:27 18/08/2010, anderson nuel wrote:
>> Dear r-help,
>>
>> No, I find errors in the file C:/Rp/namepackage.Rcheck/00check.txt :
>>
>> * using log directory 'C:/Rpackage/namepackage.Rcheck'
>> * using R version 2.10.1 (2009-12-14)
>> * using session charset: ISO8859-1
>> * checking for file 'namepackage/DESCRIPTION' ... OK
>> * checking extension type ... Package
>> * this is package 'namepackage' version '1.0'
>> * checking package dependencies ... OK
>> * checking if this is a source package ... OK
>> * checking for executable files ... OK
>> * checking whether package 'namepackage' can be installed ... OK
>> * checking package directory ... OK
>> * checking for portable file names ... OK
>> * checking DESCRIPTION meta-information ... OK
>> * checking top-level files ... OK
>> * checking index information ... OK
>> * checking package subdirectories ... OK
>> * checking R files for non-ASCII characters ... OK
>> * checking R files for syntax errors ... OK
>> * checking whether the package can be loaded ... OK
>> * checking whether the package can be loaded with stated dependencies ...
>> OK
>> * checking for unstated dependencies in R code ... OK
>> * checking S3 generic/method consistency ... OK
>> * checking replacement functions ... OK
>> * checking foreign function calls ... OK
>> * checking R code for possible problems ... NOTE
>> comb: no visible global function definition for 'copy_bloc'
>> comb: no visible global function definition for 'copy_interl'
>> * checking Rd files ... OK
>> * checking Rd metadata ... OK
>> * checking Rd cross-references ... OK
>> * checking for missing documentation entries ... WARNING
>> Undocumented code objects:
>> comb learn_comb nchoo
>> All user-level objects in a package should have documentation entries.
>> See the chapter 'Writing R documentation files' in manual 'Writing R
>> Extensions'.
>> * checking for code/documentation mismatches ... OK
>> * checking Rd \usage sections ... OK
>> * checking examples ... ERROR
>> Running examples in 'namepackage-Ex.R' failed.
>> The error most likely occurred in:
>> > ### * RT
>> >
>> > flush(stderr()); flush(stdout())
>> >
>> > ### Name: RT
>> > ### Title: RT
>> > ### Aliases: RT
>> >
>> > ### ** Examples
>> >
>> > data(asia)
>> Warning in data(asia) : data set 'asia' not found
>> > RT(asia, c(2,2,2), c(1,2,3),c("a","b","c" ))
>> Error in nrow(data) : object 'x' not found
>> Calls: RT -> array -> nrow
>> Execution halted
>>
>>
>> I think my problem in creating the package in this: I have a singleglobal
>> function (RT) in my package, but inside RT I need to call several other
>> function( comb l,earn_comb, nchoo). When I used package.sekeleton, Iput in
>> lists all the functions(comb l,earn_comb, nchoo,RT),but in the 'man' I
>> left
>> only namepackage-package.Rd and RT.Rd. When I did do this, is it true??
>>
>>
>> Are you using a namespace?
>> If not I think it may help you with the warnings about documentation.
>>
>> The other warning tells you R cannot find asia. You need to make it
>> available.
>>
>>
>> Best Regards,
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> 2010/8/16, Uwe Ligges <<mailto:lig...@statistik.tu-dortmund.de>
>> lig...@statistik.tu-dortmund.de>:
>> >
>> >
>> >
>> > On 16.08.2010 18:52, anderson nuel wrote:
>> >
>> >> Dear r-help,
>> >>
>> >> the file C:/Rp/namepackage.Rcheck/00install.out :
>> >>
>> >> * install options are ' --no-html'
>> >> * installing *source* package 'namepackage' ...
>> >> ** R
>> >> ** preparing package for lazy loading
>> >> ** help
>> >> *** installing help indices
>> >> ** building package indices ...
>> >> ** MD5 sums
>> >> * DONE (namepackage)
>> >>
>> >
>> >
>> > So it was successful.
>> >
>> > Uwe
>> >
>> >
>> >
>> > Best Regards,
>> >>
>> >>
>> >>
>> >>
>> >>
>> >> 2010/8/14, Uwe Ligges<<mailto:lig...@statistik.tu-dortmund.de>
>> lig...@statistik.tu-dortmund.de>:
>> >>
>> >>>
>> >>>
>> >>>
>> >>> On 14.08.2010 11:21, anderson nuel wrote:
>> >>>
>> >>> Dear r-help,
>> >>>>
>> >>>> I run R CMD INSTALL :
>> >>>>
>> >>>> c:\Rp>R CMD INSTALL namepackage
>> >>>>
>> >>>> *installing to library'c:/PROGRA~1/R/R-210~1-1/library'
>> >>>> *installing *source* 'namepackage'...
>> >>>> **R
>> >>>> **preparing package for lazy loading
>> >>>> **help
>> >>>> Avis:./man/namepackage-package.Rd:25:'>' inatttendu<e>
>> >>>> **installing help indices
>> >>>> **building package indices
>> >>>> **MD5sums
>> >>>> *DONE<namepackage>
>> >>>>
>> >>>> best
>> >>>>
>> >>>>
>> >>>
>> >>> OK, but strange that checking the package fails now in its
>> installation
>> >>> checks. Can you send us the file
>> >>> C:/Rp/namepackage.Rcheck/00install.out
>> >>> please.
>> >>>
>> >>> Uwe Ligges
>> >>>
>> >>>
>> >>>
>> >>>
>> >>>
>> >>>> 2010/8/13, Uwe Ligges<<mailto:lig...@statistik.tu-dortmund.de>
>> lig...@statistik.tu-dortmund.de>:
>>
>> >>>>
>> >>>>
>> >>>>> In my previous maiul I asked you to run R CMD INSTALL at first
>> (rather
>> >>>>> than
>> >>>>> R CMD check).
>> >>>>>
>> >>>>> You could also look into the mentioned file
>> >>>>> C:/Rp/namepackage.Rcheck/00install.out
>> >>>>>
>> >>>>> But we really need that file to understand what is going on.
>> >>>>>
>> >>>>> Uwe Ligges
>> >>>>>
>> >>>>>
>> >>>>>
>> >>>>>
>> >>>>>
>> >>>>>
>> >>>>> On 13.08.2010 15:12, anderson nuel wrote:
>> >>>>>
>> >>>>> Dear r-help,
>> >>>>>
>> >>>>>> I try this command R CMD INSTALL,but still there are errors.
>> >>>>>> I look into the installation log file in the namepackage.Rcheck :
>> >>>>>> * using log directory 'C:/Rp/namepackage.Rcheck'
>> >>>>>> * using R version 2.10.1 (2009-12-14)
>> >>>>>> * using session charset: ISO8859-1
>> >>>>>> * checking for file 'namepackage/DESCRIPTION' ... OK
>> >>>>>> * checking extension type ... Package
>> >>>>>> * this is package 'namepackage' version '1.0'
>> >>>>>> * checking package dependencies ... OK
>> >>>>>> * checking if this is a source package ... OK
>> >>>>>> * checking for executable files ... OK
>> >>>>>> * checking whether package 'namepackage' can be installed ... ERROR
>> >>>>>> Installation failed.
>> >>>>>> See 'C:/Rp/namepackage.Rcheck/00install.out' for details.
>> >>>>>> From That , I do not know where is the error
>> >>>>>> I have only one function RT, but I need several other functions
>> within
>> >>>>>> the RT function, while
>> >>>>>> using package.skeleton() I put in the function list seulemnt RT or
>> any
>> >>>>>> other functions, or I shall all functions in the same page??
>> >>>>>> Best
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>>> 2010/7/31, Uwe Ligges<<mailto:lig...@statistik.tu-dortmund.de>
>> lig...@statistik.tu-dortmund.de
>> >>>>>> <mailto:lig...@statistik.tu-dortmund.de>>:
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>>> On 30.07.2010 15:44, anderson nuel wrote:
>> >>>>>>
>> >>>>>> Dear r-help,
>> >>>>>>
>> >>>>>> I create a package. When I installed this package (I use
>> this
>> >>>>>> command : R
>> >>>>>> CMD check namepackage),I find an error: * checking whether
>> >>>>>> package
>> >>>>>> 'namepackage' can be installed ... ERROR
>> >>>>>> Installation failed.
>> >>>>>>
>> >>>>>> >
>> >>>>>>
>> >>>>>> Could you help me to find solution for this error.
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>>> Well, either take a look into the installation log file in the
>> >>>>>> namepackage.Rcheck directory or start a bit more slowly by just
>> >>>>>> trying to install without a check in the first step by R CMD
>> >>>>>> INSTALL.
>> >>>>>>
>> >>>>>> Without seeing the installation log, we cannot help either.
>> >>>>>>
>> >>>>>> Best,
>> >>>>>> Uwe Ligges
>> >>>>>>
>> >>>>>>
>> >>>>>> Best Regards
>> >>>>>>
>> >>>>>> [[alternative HTML version deleted]]
>> >>>>>>
>> >>>>>> ______________________________________________
>> >>>>>> <mailto:R-help@r-project.org>R-help@r-project.org<mailto:
>> R-help@r-project.org> mailing
>> >>>>>> list
>> >>>>>> <https://stat.ethz.ch/mailman/listinfo/r-help>
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> >>>>>> PLEASE do read the posting guide
>> >>>>>> <http://www.r-project.org/posting-guide.html>
>> http://www.R-project.org/posting-guide.html<http://www.r-project.org/posting-guide.html>
>> <http://www.r-project.org/posting-guide.html>
>> >>>>>> <<http://www.r-project.org/posting-guide.html>
>> http://www.r-project.org/posting-guide.html>
>> >>>>>> <http://www.r-project.org/posting-guide.html>
>> >>>>>> <<http://www.r-project.org/posting-guide.html>
>> http://www.r-project.org/posting-guide.html>
>> >>>>>> and provide commented, minimal, self-contained, reproducible
>> >>>>>> code.
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>>>
>> >>>>
>> >>
>>
>> [[alternative HTML version deleted]]
>>
>>
>> Michael Dewey
>> <http://www.aghmed.fsnet.co.uk/>http://www.aghmed.fsnet.co.uk
>>
>>
> Michael Dewey
> http://www.aghmed.fsnet.co.uk
>
>
[[alternative HTML version deleted]]
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