CRAN (and crantastic) updates this week New packages ------------
* DCGL (1.0) Bao-Hong Liu http://crantastic.org/packages/DCGL Functions for basic differential coexpression analyses: gene filtering, link filtering, DCG (Differentially-Coexpressed Gene) identification and DCL (Differentially-Coexpressed Links) identification.Two algorithms,named DCP and DCe, are provided for DCG-identification or DCG and DCL-identification. * fmsb (0.11) Minato Nakazawa http://crantastic.org/packages/fmsb Several utility functions for the book entitled "Practices of Medical and Health Data Analysis using R" (Pearson Education Japan, 2007) * IniStatR (1.0.0) Frederic Bertrand http://crantastic.org/packages/IniStatR This packages provides datasets for the book "Initiation à la Statistique avec R", Dunod, 2010. * isva (1.0) Unknown http://crantastic.org/packages/isva Independent Surrogate Variable Analysis is a general algorithm for feature selection in the presence of potentially confounding factors. * mritc (0.3-1) Dai Feng http://crantastic.org/packages/mritc Various methods for MRI tissue classification. * mutoss (0.1-1) Kornelius Rohmeyer http://crantastic.org/packages/mutoss The Mutoss package and accompanying mutossGUI package are designed to ease the application and comparison of multiple hypothesis testing procedures. * mutossGUI (0.1-2) Kornelius Rohmeyer http://crantastic.org/packages/mutossGUI A graphical user interface for the MuToss Project * refund (0.1-0) Lei Huang http://crantastic.org/packages/refund Functions for regression with functional data. The principal methods currently implemented are (1) functional-response/scalar-predictor regression by penalized OLS or GLS; and (2) functional principal component regression for scalar responses and functional predictors. * soiltexture (1.0) Julien MOEYS http://crantastic.org/packages/soiltexture "The Soil Texture Wizard" is a set of R functions designed to produce texture triangles (also called texture plots, texture diagrams, texture ternary plots), classify and transform soil textures data. These functions virtually allows to plot any soil texture triangle / classification into any triangle geometry (isosceles, right-angled triangles, etc.). This set of function is expected to be useful to people using soil textures data from different soil texture classification or different particle size systems. Several texture triangles are predefined: USDA; FAO (which is also the triangle for the soil map of Europe); Aisne (France); GEPPA (France); German triangle (Bodenkundliche Kartieranleitung 1994); Soil Survey of England and Wales (UK); Australian triangle; Belgian triangle; Canadian triangle; ISSS triangle; Romanian traingle. The Soil Texture Wizard is initially develloped from the functions 'soil.texture()' from the package 'plotrix' by Jim Lemon et al. * TunePareto (1.0) Hans Kestler http://crantastic.org/packages/TunePareto Generic methods for parameter tuning of classification algorithms using multiple scoring functions Updated packages ---------------- ade4 (1.4-16), adlift (1.2-3), AICcmodavg (1.08), aqp (0.94-1), aspace (2.5), aspace (2.4), BioStatR (1.0.2), bnlearn (2.2), caret (4.54), caret (4.53), clustTool (1.6.5), coarseDataTools (0.3), constrainedKriging (0.1.2), DEMEtics (0.8.1), emdbook (1.2.2.1), FitAR (1.80), fpc (2.0-2), futile.paradigm (1.0.1), futile.paradigm (1.0.2), gamlss (4.0-3), gamlss.add (4.0-1), gamlss.data (4.0-1), genoPlotR (0.5.1), GEOmap (1.5-9), GEVcdn (1.0.2), GillespieSSA (0.5-4), gllm (0.33), glmperm (1.0-3), gRapHD (0.1.7), HFWutils (0.9.4.2010.08.20), hts (1.3), HWEintrinsic (1.1.1), igraph (0.5.4-1), intervals (0.13.3), ipw (1.0-6), laeken (0.1.3), LDheatmap (0.2-9), lme4 (0.999375-35), lmPerm (1.1-2), lordif (0.1-6), lpSolveAPI (5.5.2.0), magma (0.2.1-3), MCMCglmm (2.06), mondate (0.9.08.15), mondate (0.9.08.19.02), mratios (1.3.13), nacopula (0.4-3), nleqslv (1.7), nlt (2.1-1), NMF (0.5), pROC (1.3.1), qpcR (1.3-1), qpcR (1.3-0), qtl (1.18-7), qualityTools (1.01), R.utils (1.5.0), r4ss (1.10), rAverage (0.3-3), rbounds (0.5), RcmdrPlugin.HH (1.1-26), robCompositions (1.4.3), RPMG (2.0-0), RSEIS (2.4-4), rTOFsPRO (1.2), Runiversal (1.0.1), rwm (1.52), sdcMicro (2.6.5), sem (0.9-21), simFrame (0.3.2), simFrame (0.3.3), simFrame (0.3.1), spdep (0.5-19), spikeslab (1.1.1), TGUICore (0.9.12), TGUITeaching (0.9.12), tm (0.5-4), traitr (0.10), TraMineR (1.6-1), TSAgg (0.2-0), vegan (1.17-4), VIM (1.4.1), wq (0.2-5) This email provided as a service for the R community by http://crantastic.org. Like it? Hate it? Please let us know: crana...@gmail.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
