On Jul 12, 2010, at 6:46 PM, David Winsemius wrote:


On Jul 12, 2010, at 6:03 PM, harsh yadav wrote:

Hi,

I have a function in R that compares two very large strings for about 1
million records.

The strings are very large URLs like:-


http://query.nytimes.com/gst/sitesearch_selector.html?query=US+Visa+Laws&type=nyt&x=25&y=8 .
..

or of larger lengths.

The data-frame looks like:-

id url
1
http://query.nytimes.com/gst/sitesearch_selector.html?query=US+Visa+Laws&type=nyt&x=25&y=8 .
..
2   http://query.nytimes.com/search/sitesearch?query=US+Visa+Laws&srchst=cse
3
http://www.google.com/search?hl=en&q=us+student+visa+changes+9/11+washington+post&start=10&sa=N .
..
4
http://www.google.com/search?hl=en&q=us+student+visa+changes+9/11+washington+post&start=10&sa=N
5
http://www.google.com/url?sa=U&start=11&q=http://app1.chinadaily.com.cn/star/2004/0610/fo4-1.html&ei=uUKwSe7XN9CCt

and so on for about 1 million records.

Here is the function that I am using to compare the two strings:-

stringCompare <- function(currentURL, currentId){
j <- currentId - 1
while(j>=1)
previousURL <-
previousURLLength <- nchar(previousURL)
#Compare smaller with bigger
if(nchar(currentURL) <= previousURLLength){
matchPhrase <- substr(previousURL,1,nchar(currentURL))
if(matchPhrase == currentURL){
return(TRUE)
}
}else{
matchPhrase <- substr(currentURL,1,previousURLLength)
if(matchPhrase == previousURL){
return(TRUE)
}
}
j <- j -1
}
return(FALSE)
}

Couldn't you just store the "url" vector after running through nchar and then do the comparison in a vectorized manner?

test <- rd.txt('id url
1 "http://query.nytimes.com/gst/sitesearch_selector.html?query=US+Visa+Laws&type=nyt&x=25&y=8 " 2 "http://query.nytimes.com/search/sitesearch?query=US+Visa+Laws&srchst=cse " 3 "http://www.google.com/search?hl=en&q=us+student+visa+changes+9/11+washington+post&start=10&sa=N " 4 "http://www.google.com/search?hl=en&q=us+student+visa+changes+9/11+washington+post&start=10&sa=N " 5 "http://www.google.com/url?sa=U&start=11&q=http://app1.chinadaily.com.cn/star/2004/0610/fo4-1.html&ei=uUKwSe7XN9CCt "', stringsAsFactors=FALSE)

copyUrls <- test[,"url"]
sizeUrls <- nchar(copyUrls)
lengU <- length(sizeUrls)
sizidx <- pmax(sizeUrls[1:(lengU-1)], sizeUrls[2:(lengU)])
substr(copyUrls[2:lengU], 1, sizidx) == substr(copyUrls[1: (lengU-1)], 1, sizidx)

#[1] FALSE FALSE  TRUE FALSE


Let me hasten to admit that when I tried to fix what I thought was an error in that program, I go the same result. It seemed as though I should have been getting errors by choosing the maximum string length. Changing the pmax to pmin did not alter the results ... to my puzzlement ... until I further noticed that urls #3 and #4 were of the same length. When I extend the lengths, then only the version using pmin works properly.


--
David.

Here, I compare the URL at a given row with all the previous URLs in the data-frame. I compare the smaller of the two given URls with the larger one
(upto the length of the smaller).

When I run the above function for about 1 million records, the execution
becomes really slow, which otherwise is fast if I remove the
string comparison step.

Any ideas how it can be implemented in a fast and efficient way.

Thanks and Regards,
Harsh Yadav

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David Winsemius, MD
West Hartford, CT

______________________________________________
R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

David Winsemius, MD
West Hartford, CT

______________________________________________
R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

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