Been and R-user for about 5 years now in an industrial setting, and always find the mailing list most helpful. I have run into problem compiling igraph on R. I have contacted the maintainer of igraph, and he has determined that it is not an igraph problem.
System is FreeBSD 7.2, R-2.10.1 [also have a sandbox machine running FreeBSD 7.3, R-2.11]. Both machines fail the installation of igraph. Here is the error: Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/local/lib/R/library/igraph/libs/igraph.so': /usr/lib/libstdc+ +.so.6: version GLIBCXX_3.4.11 required by /usr/local/lib/R/library/igraph/libs/igraph.so not found Error : .onLoad failed in 'loadNamespace' for 'igraph' I built the package, then ran the linker ldd to determine if libstdc+ +.so.6 were in the correct place [and found by igraph]: libxml2.so.5 => /usr/local/lib/libxml2.so.5 (0x340e0000) libz.so.4 => /lib/libz.so.4 (0x33d89000) libiconv.so.3 => /usr/local/lib/libiconv.so.3 (0x3420a000) libR.so => /usr/local/lib/libR.so (0x34300000) libstdc++.so.6 => /usr/lib/libstdc++.so.6 (0x3455c000) libm.so.5 => /lib/libm.so.5 (0x33d9b000) libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x33db0000) libc.so.7 => /lib/libc.so.7 (0x33c83000) libblas.so.2 => /usr/local/lib/libblas.so.2 (0x33dbb000) libgfortran.so.3 => /usr/local/lib/gcc44/libgfortran.so.3(0x34651000) libintl.so.8 => /usr/local/lib/libintl.so.8 (0x34709000) libreadline.so.7 => /lib/libreadline.so.7 (0x34712000) libpcre.so.0 => /usr/local/lib/libpcre.so.0 (0x34744000) liblzma.so.0 => /usr/local/lib/liblzma.so.0 (0x34778000) libbz2.so.3 => /usr/lib/libbz2.so.3 (0x347a1000) libicuuc.so.38 => /usr/local/lib/libicuuc.so.38 (0x347b2000) libicui18n.so.38 => /usr/local/lib/libicui18n.so.38 (0x348d0000) libncurses.so.7 => /lib/libncurses.so.7 (0x34a27000) libthr.so.3 => /lib/libthr.so.3 (0x34a66000) libicudata.so.38 => /usr/local/lib/libicudata.so.38 (0x34a7b000) So it appears to be there, but still I get this error. Any guidance? Thanks. -- jim smith <n0...@sbcglobal.net> ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
