Did you try to install using install.packages()? > install.packages("caret") Warning in install.packages("caret") : argument 'lib' is missing: using '/scratch5/hb/R/R_LIBS/linux/library/'
trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/caret_3.08.tar.gz' Content type 'application/x-gzip' length 1428629 bytes (1.4 Mb) opened URL ================================================== downloaded 1.4 Mb /server/scratch5/hb/R/R_LIBS/linux/library * Installing *source* package 'caret' ... ** libs gcc -std=gnu99 -I/usr/local/linux/R-2.6.1/include -I/usr/local/linux/R-2.6.1/include -I/usr/local/include -fpic -g -O2 -c caret.c -o caret.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o caret.so caret.o -L/usr/local/linux/R-2.6.1/lib -lR ** R ** data ** inst ** preparing package for lazy loading Loading required package: lattice ** help >>> Building/Updating help pages for package 'caret' Formats: text html latex example BloodBrain text html latex applyProcessing text html latex example [snip] The downloaded packages are in /tmp/Rtmpwxs3CH/downloaded_packages > library(caret) Loading required package: lattice > /Henrik On 08/12/2007, Giovane <[EMAIL PROTECTED]> wrote: > Thank you Max Kuhn, > > So I decided to install caret (R version 2.6.0, gcc 4.1.2, caret 3.08, > slackware 12 and kernel 2.6.17.11), and I've got a problem: > R CMD INSTALL caret > * Installing to library '/usr/local/lib/R/library' > * Installing *source* package 'caret' ... > ** libs > //(it goes with no problem..) > > //here comes the bug > > ** building package indices ... > Error in load(zfile, envir = envir) : error reading from connection > Calls: <Anonymous> ... .build_data_index -> list_data_in_pkg -> <Anonymous> > -> switch -> load > Execution halted > ERROR: installing package indices failed > ** Removing '/usr/local/lib/R/library/caret' > > Any ideas? > On Dec 8, 2007 3:38 PM, Max Kuhn <[EMAIL PROTECTED]> wrote: > > > > > > > 1. can I measure de R-squared value between the predicted(by the model) > > and > > > real (observed) values.? > > > 2. Measure the RMSE error . > > > > > > > There is a function in the caret package called postResample that will > > do that (even if you aren't using resampling). > > > > As has been previously noted on this list, there are a number of > > formulas for R-squared. This function uses the square of the > > correlation between the observed and predicted. The next version of > > caret will offer a choice of formulas. > > > > -- > > > > Max > > > > > > -- > Best regards, > > Giovane > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.