On Thu, Dec 6, 2012 at 10:12 AM, Martin Maechler <maech...@stat.math.ethz.ch> wrote: >>>>>> elijah wright <e...@stderr.org> >>>>>> on Wed, 5 Dec 2012 14:23:51 -0600 writes: > > > Is that a build with "good old" Studio or a build with a recent GCC? > > I don't have any direct comments that would be helpful to you - but let > me > > know if you need a place to do some test builds and try to figure it > out. > > I can certainly help you with that. > > > [Are more Solaris-esque build slaves needed? Someone give a shout if > so... > > we can sponsor some infrastructure there.] > > `` shout! '' > > as long we (R community at large "in principle", de facto, > AFAIK, Prof Brian Ripley) > can have a Solaris testbed for CRAN which is reflected in the > CRAN package check, it would be really great if someone provided > a "Solaris-builder" server similar to the > win-builder.r-project.org one that Uwe (and his Depaertment/ > University) provides.
Getting a solaris-builder would be awesome. My understanding is that people both use a Solaris supplied compiler as well as GCC regularly on this platform (ok, I don't fully know what I am talking about here, since I don't have access to Solaris), and having one builder for each compiler would be awesome. (As would a linux machine with an intel compiler, now that I am dreaming). Additionally, right now I personally have a need for a login to a Solaris machine. Some build problems with Rgraphviz has been reported on Solaris and there is no way I can fix them without command line access. Best, Kasper Daniel Hansen Assistant Professor McKusick-Nathans Institute of Genetic Medicine Department of Biostatistics Johns Hopkins University Website: http://www.biostat.jhsph.edu/~khansen > Martin > > > --elijah > > (@Joyent) > > > > > On Mon, Dec 3, 2012 at 11:28 AM, Jon Clayden <jon.clay...@gmail.com> > wrote: > > >> Dear all, > >> > >> The current version of my RNiftyReg package is failing to compile on > CRAN's > >> Solaris testbed, but I don't have access to a Solaris system to debug > on, > >> and Googling the error hasn't been very helpful. The error is > >> > >> CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -DNDEBUG > >> -DRNIFTYREG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native > >> -nofstore -c niftyreg.cpp -o niftyreg.o > >> "_reg_f3d_sym.cpp", line 25: Error: reg_f3d may not have a type > qualifier. > >> "niftyreg.cpp", line 527: Where: While instantiating > >> "reg_f3d_sym<double>::reg_f3d_sym(int, int)". > >> "niftyreg.cpp", line 527: Where: Instantiated from non-template > code. > >> "_reg_f3d_sym.cpp", line 26: Error: reg_f3d<T> cannot be initialized > >> in a constructor. > >> "niftyreg.cpp", line 527: Where: While instantiating > >> "reg_f3d_sym<double>::reg_f3d_sym(int, int)". > >> "niftyreg.cpp", line 527: Where: Instantiated from non-template > code. > >> "_reg_f3d_sym.cpp", line 26: Error: Could not find > >> reg_f3d<double>::reg_f3d() to initialize base class. > >> "niftyreg.cpp", line 527: Where: While instantiating > >> "reg_f3d_sym<double>::reg_f3d_sym(int, int)". > >> "niftyreg.cpp", line 527: Where: Instantiated from non-template > code. > >> 3 Error(s) detected. > >> *** Error code 2 > >> make: Fatal error: Command failed for target `niftyreg.o' > >> > >> > >> (Full log at [1].) The relevant part of the source is a C++ class > >> constructor, part of the library that my package interfaces to: > >> > >> template <class T> > >> reg_f3d_sym<T>::reg_f3d_sym(int refTimePoint,int floTimePoint) > >> :reg_f3d<T>::reg_f3d(refTimePoint,floTimePoint) > >> { > this-> executableName=(char *)"NiftyReg F3D SYM"; > >> > this-> backwardControlPointGrid=NULL; > this-> backwardWarped=NULL; > this-> backwardWarpedGradientImage=NULL; > this-> backwardDeformationFieldImage=NULL; > this-> backwardVoxelBasedMeasureGradientImage=NULL; > this-> backwardNodeBasedGradientImage=NULL; > >> > this-> backwardBestControlPointPosition=NULL; > this-> backwardConjugateG=NULL; > this-> backwardConjugateH=NULL; > >> > this-> backwardProbaJointHistogram=NULL; > this-> backwardLogJointHistogram=NULL; > >> > this-> floatingMaskImage=NULL; > this-> currentFloatingMask=NULL; > this-> floatingMaskPyramid=NULL; > this-> backwardActiveVoxelNumber=NULL; > >> > this-> inverseConsistencyWeight=0.1; > >> > >> #ifndef NDEBUG > >> printf("[NiftyReg DEBUG] reg_f3d_sym constructor called\n"); > >> #endif > >> } > >> > >> The error does not occur on any Windows, Linux or OS X system which I > have > >> access to, so this would seem to be an issue relating to the Solaris > >> compiler toolchain in particular. Can anyone shed any light on it, > please? > >> > >> Thanks in advance, > >> Jon > >> > >> -- > >> [1] > >> > >> > http://www.r-project.org/nosvn/R.check/r-patched-solaris-x86/RNiftyReg-00install.html > >> > > ______________________________________________ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
