I recently moved a function 'subset.with.warning' into the 'mvbutils' package (a version not yet on CRAN). When I tried RCMD CHECK, I got this warning:
* checking S3 generic/method consistency ... WARNING subset: function(x, ...) subset.with.warning: function(x, cond, mess.head, mess.cond, row.info, sub) See section 'Generic functions and methods' of the 'Writing R Extensions' manual. I know that S3 method arguments need to be compatible with arguments of the generic. However, 'subset.with.warning' is deliberately not a registered S3 method, and its USAGE section doesn't include a \method{generic}{class} statement. I couldn't see anything in "R Extensions" that says "don't do this", so I'm wondering: - should this really be a NOTE not a WARNING (or nothing at all)? - if not, shouldn't there be a more explicit statement to the effect that "if R decides it's a method, then it damned well is a method, whether you think it is or not"? - and if so, should there also be a check for functions that look like methods but aren't registered and declared as such? My preference would be for the first, FWIW. Admittedly, just because I didn't register 'subset.with.warning' as an S3 method, that won't stop 'subset' from trying to use it if it ever encounters an object of class "with.warning". It's a risk that I'm happy to take, though CRAN might not be... I made the warning go away by adding a '...' argument to the end of 'subset.with.warning', but that's not pretty. Mark Bravington CSIRO Hobart Australia > sessionInfo() R version 2.11.1 Patched (2010-06-30 r52418) i386-pc-mingw32 locale: [1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252 LC_MONETARY=English_Australia.1252 LC_NUMERIC=C [5] LC_TIME=English_Australia.1252 attached base packages: [1] grDevices tools tcltk stats graphics utils methods base other attached packages: [1] ad_1.0 chstuff_1.0 handy2_1.2 tweedie_2.0.2 statmod_1.4.1 handy_1.1 debug_1.2.3 mvbutils_2.5.2 > ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel