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Hello dear Maintainer,
I report a bug (or at least a weak point needing documentation)
located in the nls.c file of the stats package.
($BASE/src/library/stats/src/nls.c, svn version 50393)
They lie in the line 120 and 129, where the msgbuf char array is set
to the size limit of 70. Intriguingly in case of long formulaes
overriding this limit, the R session will crash complaining buffer
overflow detected (see the attachment session_crash_report). After
changing the array size to 255 (see the patch.nls file), the error is
avoided. I suggest either documentating the size limit of the formulae,
or to enlarge the array.
Best wishes,
Jitao David Zhang
Attached: R.version
_
platform i686-pc-linux-gnu
arch i686
os linux-gnu
system i686, linux-gnu
status Under development (unstable)
major 2
minor 11.0
year 2009
month 11
day 06
svn rev 50320
language R
version.string R version 2.11.0 Under development (unstable) (2009-11-06
r50320)
- --
THINK BEFORE YOU PRINT: DO OUR ENVIRONMENT GOOD
Jitao David Zhang
Computational Biology/Bioinformatics Ph.D. Candidate
Division of Molecular Genome Analysis, DKFZ
Im Neuenheimer Feld 580,
Heidelberg D-69120
Germany
Tel: 49-(0)6221-424711
Calendar:
http://www.google.com/calendar/embed?src=38m77vcknecr59sbpdj0vofndo%40group.calendar.google.com
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--------------020309030400080109090707
Content-Type: text/plain;
name="patch.nls"
Content-Transfer-Encoding: 7bit
Content-Disposition: inline;
filename="patch.nls"
--- nls.c 2009-07-30 08:30:11.000000000 +0200
+++ nls_new.c 2009-11-11 16:58:41.000000000 +0100
@@ -138,7 +138,7 @@
#define NON_CONV_FINIS_1(_ID_, _MSG_, _A1_) \
if(warnOnly) { \
- char msgbuf[70]; \
+ char msgbuf[255]; \
warning(_MSG_, _A1_); \
sprintf(msgbuf, _MSG_, _A1_); \
return CONV_INFO_MSG(msgbuf, _ID_); \
@@ -148,7 +148,7 @@
#define NON_CONV_FINIS_2(_ID_, _MSG_, _A1_, _A2_) \
if(warnOnly) { \
- char msgbuf[70]; \
+ char msgbuf[255]; \
warning(_MSG_, _A1_, _A2_); \
sprintf(msgbuf, _MSG_, _A1_, _A2_); \
return CONV_INFO_MSG(msgbuf, _ID_); \
--------------020309030400080109090707--
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