Your message dated Thu, 09 May 2013 11:56:06 +0200
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and subject line forgot to close
has caused the Debian Bug report #686353,
regarding weave incompatibilities with g++ 4.4
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
686353: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=686353
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: python-scipy
Version: 0.7.2+dfsg1-1
Severity: important
Tags: patch upstream
While building backport packages of new python-brian release I ran into a known
issue:
/usr/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/mathfunc.h: In static
member function 'static long int blitz::_bz_abs<long int>::apply(long int)':
/usr/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/mathfunc.h:45: error:
'labs' is not a member of 'std'
...
which was fixed upstream (6e1155ea14e85efdb6c3d944ded3583c12d01778) and
even patched in Ubuntu's elderly version of scipy:
http://projects.scipy.org/scipy/attachment/ticket/739/weave-739.patch
So I would recommend applying this patch in Debian stable squeeze version of
scipy and shipping it via updates. I am attaching the proposed patch refreshed
for Debian package
-- System Information:
Debian Release: 6.0.5
APT prefers stable
APT policy: (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 2.6.32-5-amd64 (SMP w/8 CPU cores)
Locale: LANG=en_US, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash
Versions of packages python-scipy depends on:
ii libamd2.2.0 1:3.4.0-2 approximate minimum degree orderin
ii libatlas3gf-base [libla 3.8.3-27 Automatically Tuned Linear Algebra
ii libblas3gf [libblas.so. 1.2-8 Basic Linear Algebra Reference imp
ii libc6 2.11.3-3 Embedded GNU C Library: Shared lib
ii libgcc1 1:4.4.5-8 GCC support library
ii libgfortran3 4.4.5-8 Runtime library for GNU Fortran ap
ii liblapack3gf [liblapack 3.2.1-8 library of linear algebra routines
ii libstdc++6 4.4.5-8 The GNU Standard C++ Library v3
ii libumfpack5.4.0 1:3.4.0-2 sparse LU factorization library
ii python 2.6.6-3+squeeze7 interactive high-level object-orie
ii python-central 0.6.16+nmu1 register and build utility for Pyt
ii python-numpy 1:1.4.1-5 Numerical Python adds a fast array
Versions of packages python-scipy recommends:
ii g++ [c++-compiler] 4:4.4.5-1 The GNU C++ compiler
ii g++-4.3 [c++-compiler] 4.3.5-4 The GNU C++ compiler
ii g++-4.4 [c++-compiler] 4.4.5-8 The GNU C++ compiler
Versions of packages python-scipy suggests:
ii python-profiler 2.6.6-1 deterministic profiling of any Pyt
-- no debconf information
--- Begin Message ---
Origin: http://projects.scipy.org/scipy/attachment/ticket/739/weave-739.patch
Applied-Upstream: 6e1155ea14e85efdb6c3d944ded3583c12d01778
Last-Update: 2012-08-31
--- a/scipy/weave/blitz/blitz/mathfunc.h
+++ b/scipy/weave/blitz/blitz/mathfunc.h
@@ -12,6 +12,8 @@
#include <blitz/prettyprint.h>
#endif
+#include <cstdlib>
+
BZ_NAMESPACE(blitz)
// abs(P_numtype1) Absolute value
--- a/scipy/weave/blitz/blitz/blitz.h
+++ b/scipy/weave/blitz/blitz/blitz.h
@@ -65,6 +65,8 @@
#define BZ_THROW // Needed in <blitz/numinquire.h>
+#include <cstdlib>
+
BZ_NAMESPACE(blitz)
#ifdef BZ_HAVE_STD
--- a/scipy/weave/blitz/blitz/prettyprint.h
+++ b/scipy/weave/blitz/blitz/prettyprint.h
@@ -22,6 +22,8 @@
#ifndef BZ_PRETTYPRINT_H
#define BZ_PRETTYPRINT_H
+#include <cstdlib>
+
BZ_NAMESPACE(blitz)
class prettyPrintFormat {
--- End Message ---
--- End Message ---
--- Begin Message ---
Version: 0.8.0+dfsg1-1
--- End Message ---
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