trias: > > One of the things I would like to do is to fetch all data from a certain > distance from gene ATGs say 100+/- bp and calculate the bp average over all > genes over this region.
I know absolutely nothing about your problem domain, but if your distance function is metric, you can use this: http://well-adjusted.de/mspace.py or that: http://code.activestate.com/recipes/572156/ The latter (by Baerophile) is fast, the former (by me) has more features. Baerophile has even faster implementations (non-Python) as well. J. -- I am worried that my dreams pale in comparison beside TV docu-soaps. [Agree] [Disagree] <http://www.slowlydownward.com/NODATA/data_enter2.html>
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